Frondihabitans sucicola: GCM10025867_09330
Help
Entry
GCM10025867_09330 CDS
T09158
Name
(GenBank) hypothetical protein
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
fsb
Frondihabitans sucicola
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsb03032
]
GCM10025867_09330
03400 DNA repair and recombination proteins [BR:
fsb03400
]
GCM10025867_09330
Enzymes [BR:
fsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GCM10025867_09330
DNA replication proteins [BR:
fsb03032
]
Prokaryotic type
DNA Topoisomerases
GCM10025867_09330
DNA repair and recombination proteins [BR:
fsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GCM10025867_09330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BDZ48692
LinkDB
All DBs
Position
858089..859843
Genome browser
AA seq
584 aa
AA seq
DB search
MADETDDTTGGIPEGVEPREFAAALKRDSIEAVDLQLEMQRSYLDYAMSVIVGRALPEVR
DGLKPVHRRVIYAMYDGGYRPDRAFSKCARVVGEVMGNFHPHGDSAIYDALVRLVQPWSL
RYPLALGQGNFGSPGNDGAAAPRYTETKMAPLALEMVRDIDEDTVDFQDNYDGRTQEPAI
LPARFPNLLVNGSVGIAVGMATNIPPHNLREVAAGAQWYLEHPDANREELLEALMQRIKG
PDFPTGAQILGVRGIHDAYRTGRGSITMRSVVNVEEIQGRTCLVVTELPYQVNPDNLAIK
IADLVKEGRVAGIADIRDETSGRTGQRLVIVLKRDAVAKVVLNNLYKHTSLQENFGANML
AIVDGVPRTLPLDGFISAWVDHQIEVIVRRTQFRLRKAEADAHILRGYIKALDALDDVIA
LIRRSQTVDDARAGLIDLLDVDELQANAILAMQLRRLAALERQKIQDDHDELERKILDFQ
DILAKPVRQRTIVSEELQEITDKFGDDRRTEIMFGFDGDMSVEDLIPEEEMVVTLTRGGY
IKRTRSDNYRSQHRGGKESRALSSAPTTWSSTSSSRRRTTGCCS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgagaccgacgacacgaccggcggcattcccgaaggtgtggagccccgcgag
ttcgcggcagcgctgaagcgcgacagcatcgaagcggtcgaccttcagctcgagatgcag
cgctcctacctcgactacgcgatgagcgtcatcgtggggcgcgccctcccggaggtgcgc
gacggcctcaagccggtacaccgccgcgtgatctacgcgatgtacgacggcggctaccgg
cccgaccgcgccttctcgaagtgcgcgcgcgtcgtcggcgaggtgatgggaaacttccac
ccccacggcgactcggccatctacgacgccctcgtccggctcgtccagccgtggagcctc
cgctacccgctggccctcgggcagggcaacttcggttcgcccggcaacgacggcgcagcg
gcaccccggtacacagagaccaagatggccccgctggcactcgagatggtgcgcgacatc
gacgaagacaccgtcgacttccaagacaactacgacggtcgcacgcaagaacccgcgatc
ctgcccgcccggttcccgaacctcctcgtgaacggctcggtcggcatcgcggtcggcatg
gccaccaacatccctccgcacaacctgcgcgaggtggccgccggcgcccagtggtacctc
gagcaccccgacgccaaccgcgaggagctcctcgaggcgctcatgcagcgcatcaagggc
ccggacttcccgaccggcgcgcagatcctcggcgtccgcggcatccacgacgcctaccgc
accggtcgcggctcgatcaccatgcgctcggtcgtcaacgtcgaggagatccaggggcgc
acctgcctcgtggtcaccgagctgccctaccaggtcaaccccgacaacctggcgatcaag
atcgccgacctcgtgaaagagggccgcgtcgccggcatcgccgatatccgcgacgagacc
tccggccgaacgggtcagcggctggtcatcgtgctcaagcgcgacgcggtcgcgaaggtc
gtcctcaacaacctctacaagcacacctctctgcaagagaacttcggtgcgaacatgctg
gcgatcgtcgacggtgtgccgcgcacgctgcccctcgacggcttcatctccgcgtgggtc
gaccaccagatcgaggtcatcgtccgccgcacgcagttccgtctgcggaaggccgaagca
gacgcgcacatcctgcgcgggtacatcaaggccctcgacgccctcgacgacgtcatcgcc
ctgatccgccggtcgcagaccgtcgacgacgcccgagccgggctgatcgatctcctcgac
gtcgacgagctccaggccaacgccatcctcgcgatgcagctgcgccgcttggccgctctg
gagcgccagaagatccaggacgaccacgacgagctcgagcgcaagatcctcgacttccag
gacatcctggcgaagcccgtccgtcagcgcacgatcgtcagcgaagaacttcaagagatc
accgacaagttcggcgacgaccgtcgcaccgagatcatgttcggcttcgacggcgacatg
agcgtcgaagacctcatccccgaagaggagatggtggtcacgctgacccgcggcggttac
atcaagcgcacgcgcagcgacaactaccggtcgcagcaccgcggcggcaaggagtcaagg
gcgctcagctccgcgccgacgacgtggtcgagcacttcttcgtcacgacgacgcaccact
ggctgctgttcctga
DBGET
integrated database retrieval system
