Frondihabitans sucicola: GCM10025867_10660
Help
Entry
GCM10025867_10660 CDS
T09158
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
fsb
Frondihabitans sucicola
Pathway
fsb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GCM10025867_10660 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fsb01007
]
GCM10025867_10660 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fsb03016
]
GCM10025867_10660 (lysS)
Enzymes [BR:
fsb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
GCM10025867_10660 (lysS)
Amino acid related enzymes [BR:
fsb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
GCM10025867_10660 (lysS)
Transfer RNA biogenesis [BR:
fsb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GCM10025867_10660 (lysS)
Prokaryotic type
Other AARSs
GCM10025867_10660 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BDZ48825
UniProt:
A0ABM8GK99
LinkDB
All DBs
Position
983815..985308
Genome browser
AA seq
497 aa
AA seq
DB search
MTDAPADLTDEEVFEQKAVRLAKRERLIESGVGAYPVGVPITTTIPAVRAAYESLETDTA
SGDVVGLAGRVVHFRIGGKLCFAVLQSGDGARIQVMVSLAEVGAESLQEWKELVDLGDHV
FVSGEVISSRRGELSVLVREWAIAAKAILPLPNLHSELSEETRVRSRYLDLIVREQARTT
VRARAAVMKSLRATFDSHDFLEVETPMLQTIHGGASARPFSTHSNAFDTELFLRIAPELY
LKRAAVGGIERVFEINRNFRNEGADSTHSPEFSMIEAYQAYGDYNQIADLTQQLVQDAAV
AVSGSHVVTWADGTEYDLGGSWDRISMYESLSAAASMRITPDTPLGELQAVASDVGISVP
QETHGKFVEELWEHFVKGSLVRPTFVMDFPVDTSPLVRAHRSKPGVVEKWDLYIRGFELA
TGYSELVDPVVQRERFVEQARLAARGDVEAMRLDEDFLRALEHGMPPTGGMGMGVDRLLM
AVTGLGIRETILFPLVK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcgcccgctgaccttactgacgaagaagtcttcgagcagaaggccgtgcgc
ctggcgaagcgcgagcgcctcatcgagtcgggcgtgggcgcctaccccgtcggtgtgccg
atcacgacgaccatccccgcggtccgcgcggcgtacgagtctctcgagaccgacaccgcc
tcgggcgacgtcgtcgggctcgccggccgggtcgtgcacttccgcatcggcggcaagctc
tgtttcgccgtgctccagtcgggcgacggcgcgcgcatccaggtcatggtctccctcgcc
gaggtcggcgccgaatcgctgcaggagtggaaagagctggtcgacctgggcgaccacgtc
ttcgtctcgggcgaggtcatctcgtcgcgccgaggcgagctctccgtgctggtgagggag
tgggcgatcgcggcgaaggcgatcctgcccctgcccaacctgcactccgagctcagcgaa
gagacgcgcgtgcgcagccgctacctcgacctgatcgtgcgcgagcaggcccgtaccacc
gtgcgcgcccgcgccgccgtgatgaagtcgctgcgcgcgaccttcgactcgcacgacttc
ctcgaggtcgagaccccgatgctgcagacgatccacggcggtgcctcggcgcggccgttc
tcgacgcactcgaacgccttcgacaccgagctgttcctgcgcatcgcccccgagctctac
ctcaagcgcgcggccgtgggcggtatcgagcgcgtcttcgagatcaaccgcaacttccgc
aacgagggcgccgactcgacgcactcgcccgaattctcgatgatcgaggcctaccaggcc
tacggcgactacaaccagatcgccgacctgacccagcagctcgtccaagacgccgccgtc
gccgtctcaggatcccacgtggtcacctgggccgacggaaccgagtacgacctcggcggg
tcctgggaccgcatctcgatgtacgagtcgctctcggcggccgcgtcgatgcgcatcact
cccgacaccccgctcggtgagctccaggcggtcgcttccgacgtcggcatctcggtgccg
caagagacgcacggcaaattcgtcgaggagctctgggagcacttcgtcaagggatcgctc
gtgcgacccacgttcgtgatggacttcccggtcgacacctcgccgctcgtccgggctcac
cgctcgaagcccggcgtcgtcgagaagtgggacctctacattcgcggcttcgagctcgcc
accggctactccgagctcgtcgacccggtcgtgcagcgcgagcgcttcgtcgagcaggcg
cggctcgccgcacgcggcgacgtcgaagccatgcgcctcgacgaagacttcctgcgggct
ctcgagcacggcatgccgccgaccggaggcatgggcatgggtgtcgaccggttgctcatg
gccgtcaccggcctcggtatccgcgagacgatcctgttcccgctggtgaagtga
DBGET
integrated database retrieval system
