Frondihabitans sucicola: GCM10025867_13150
Help
Entry
GCM10025867_13150 CDS
T09158
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fsb
Frondihabitans sucicola
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsb03032
]
GCM10025867_13150
03400 DNA repair and recombination proteins [BR:
fsb03400
]
GCM10025867_13150
Enzymes [BR:
fsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GCM10025867_13150
DNA replication proteins [BR:
fsb03032
]
Prokaryotic type
DNA Topoisomerases
GCM10025867_13150
DNA repair and recombination proteins [BR:
fsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GCM10025867_13150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
BDZ49074
LinkDB
All DBs
Position
1213769..1214521
Genome browser
AA seq
250 aa
AA seq
DB search
MPRLRRTDSTRPGVTRARSGRGFTYRDDRGRTITDPDLRARIEHLAIPPAWTDVWIAPYP
NGHIQATGVDGAGRRQYLYHPTWREQKDRIKFDRALSLAESLPAARRLVTMDLRRAEPDR
ERALAAAFRMLDSGSLRVGSERYAEQHGSHGLSTLLCSHATVSGDTVSLSFPAKSGQEWE
SEIVDPDLARVIRGLKQRGARANLLAFRPEVGASWSPCTPRRSTSTSTNGPGESSRRKTS
GPSTGRWPPP
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgccttcgtcgcaccgactcgacccgccccggtgtcacgcgtgcgcgctccgga
cgcggattcacctaccgcgacgaccgcggccgcacgatcaccgatcccgacctccgcgcg
cgcatcgagcacctcgccatcccgccggcctggacggacgtctggatcgcgccgtatccg
aacgggcacatccaggcgaccggcgtggacggtgccgggcggcgacagtacctgtaccac
cccacctggcgcgagcagaaggaccgcatcaagttcgaccgcgccctgtcgctcgccgaa
tcgctgccggcggcgcggcggctcgtcacgatggacctgcggcgcgccgaacccgatcgg
gagcgcgccctggcagcggccttccgcatgctcgactcgggctcgctgcgggtcggctcg
gagcgctacgccgagcagcacggcagccatgggctgtcgacgctgctctgctcgcacgcg
accgtgagcggcgacacggtgtcactctcgtttcccgcgaagagcgggcaggagtgggag
agcgagatcgtcgacccggacctcgcgcgggtgatccgcggtctgaagcagcgcggagcg
cgcgcgaacctcctcgccttccggccggaggtgggagcatcctggtccccctgcacgccg
cggagatcaacgagtacgtccacgaacggaccgggggagagttcacggcgaaagacttcc
ggaccctccacgggacggtggccgccgccgtga
DBGET
integrated database retrieval system
