Frondihabitans sucicola: GCM10025867_14130
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Entry
GCM10025867_14130 CDS
T09158
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
fsb
Frondihabitans sucicola
Pathway
fsb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM10025867_14130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fsb02000
]
GCM10025867_14130
Transporters [BR:
fsb02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
GCM10025867_14130
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
CysA_C_terminal
Rad17
SMC_N
AAA
AAA_22
ABC_ATPase
AAA_25
AAA_16
RsgA_GTPase
AAA_28
NACHT
AAA_18
AAA_17
nSTAND3
TsaE
Motif
Other DBs
NCBI-ProteinID:
BDZ49172
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All DBs
Position
1300362..1301414
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AA seq
350 aa
AA seq
DB search
MTSTSPAPTLERLGEGATVELRGVVKSYAGSRALDRLSLTLAPGEFVALLGPSGCGKTTA
LRSLAGLESIDAGSILIDGEDVVATPVNKRDIGMVFQQYSLFPHLTVLQNVEFGLQMRRV
DSASRRRRAVEALEMVGLDHLAGRFAHQLSGGQQQRVALARALVTRPRVLLLDEPLSALD
AKVRVSLREEIRRIQTELGITTLFVTHDQEEALAVADRVAVMRAGEIEQIGSPEELYLTP
ASAFVADFVGVSNRMRGELQAGTITVRGARLASIDPTLPDGPVLAYVRPEDIAFVPPPTP
RRRTSTGRSRRPASSARSGGPRSGSTTTPSCRCSTASSSSSCSATPSRCD
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaccagccccgcccccacgctcgaacgcctcggcgagggtgcgaccgtcgaa
ctccgcggggtcgtgaagagctacgcaggatcccgcgcgctcgaccggctgagcctcacc
ctggcaccgggggagttcgtggcgctgctcggcccgtccgggtgcggcaagacgactgcg
ctgcgctcgctcgccggactcgaatccatcgacgcaggatccatcctcatcgacggcgag
gacgtggtcgcgacgccggtcaacaagcgcgacatcggcatggtgttccagcagtactcg
ctgttcccgcacctgaccgtgctgcagaacgtcgagttcggcctgcagatgcgtcgcgtc
gattcggcgagtcgccggcgccgagccgtggaggctctcgagatggtcggtctcgatcat
ctcgccggacggttcgcccatcagctgtcgggcggccagcagcagcgcgtcgccctggcg
cgggcgctcgtcacccgaccgcgcgtgctcctgctcgacgagccgctgtccgcgctcgac
gcgaaggtgcgcgtctcgctgcgcgaggagatccgcaggatccagaccgaactcggcatc
accacccttttcgtcacgcacgaccaggaggaggcgctcgccgtcgccgaccgggtcgcg
gtgatgcgcgccggagagatcgagcagatcggcagcccggaggagctctacctcacgccc
gccagcgccttcgtggcggacttcgtgggggtgagcaacaggatgcggggcgagctccag
gcggggaccatcacggtgcgaggagcgcgactcgcgtcgatcgatccgacgcttcccgac
ggcccggtgctcgcctacgtgcgaccggaggacatcgccttcgtgcccccgccgacgcct
cgccgaaggacatccacgggacggtcgcgtcgaccagcttcctcggctcgctccggcgga
ccacggtccggctcgacgacgacaccatcgtgtcggtgcagcacggcgtcgagcagcagt
tcctgttcggcgacgccgtcgcgctgcgactga
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