Frondihabitans sucicola: GCM10025867_15900
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Entry
GCM10025867_15900 CDS
T09158
Name
(GenBank) hypothetical protein
Organism
fsb
Frondihabitans sucicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
CshA_repeat
Big_9
Cadherin_5
TRAP_beta
DUF7507
CARDB
Cadherin_4
Motif
Other DBs
NCBI-ProteinID:
BDZ49349
UniProt:
A0ABM8GLR4
LinkDB
All DBs
Position
1474531..1478922
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AA seq
1463 aa
AA seq
DB search
MTVNTSAANSAVTNTAGVTFTNPITGDTDTSTTQTTSLDIAPAADLAIAKRLDTDPVVAG
RPVSYTITASNTGPQTGTGVRIADTVPAGLTGVTASGAGATCATASGTITCTVPDLAVGA
TQVITVTGTVPAGTDPGAGLSNTATISGSLADPDRSNDTASASGTVTTSADLSMTKTLTP
AVPVAGDQVTYRLTSTNSGPSDARDVTFSDPLDPGVTFVSAAVPDGTCSVTTGVVSCDVG
TIAAGATVAATVVVRLAADVKIAQNSATVASSTPDPTPGDNVSSVSVAADTEADLRVTKA
VTPTTATAGDDVTYTLHALNAGPSDALNAVLDDTLPTGITVTDVQAPPGATCGQPTDGSI
RCQWATLASGADATVTVTATVAADAPAGALTNTASIASPTPDPDTENNAASVDVSIEQNA
DLSLTKTADPATAVAGKPVTFTISATNAGPSVSRGVVITDPLPRSLVDAASSTPGCTIGD
AVLICQVGDIAPGDTATALVTATVPSDGSGTNVVNTAQVASATPDSAAGNDSATATVPVE
ASADLSVTKTAADPTVRQGRSVQYTITVRNAGPSDAQDVSVQDQPGTGVAITAATPSVGT
WNPDSLVWSVGNLADGATATLQVTGQATISGSLTNEAIESSVTPDPDTADQTATATVTST
AVTPASASPDTATASFDRPATANVLANDTPSTGATFDASSVRLRDDAGNPVAILDVPGTG
QWSVDTATGEVTFTPVAGFVGTVTVPYQVTDSDGTVAASTVSATIAGPPTSHDDTATTDQ
GDVVTVPVLDNDSADGTTLDLASLRFVDPDSGALVSTLTVPDEGTYSTTPGGEVVFTPLP
TFSGTATPVTYSVADDNGDRSTAHLTVTVDAAPAPSGVNDAVSAAYNQPVTFSPTSNDDT
GDPGAAFDPSSVRLIDPASGDPVTEVVVAGQGTYAVDTSTGLVTFTPLPSFTGAATPVAY
TATTTFGAKAGADITVTVGRPDTPTATDDAGYAPNGRPVPFSPLDNDNAGPAGTTFDTGS
LRLIDPATGDPATRVVIAGEGTWTVDTTTGAVVFTPDARFSGAATPIDYTASTNVGDSVT
GSLSASVGTAPTAAPDSATVPSGRAASVHVLDNDAPGGTATLDTSSVRLRDASGAPVTTL
VVPGKGTWSLGADGTVVFTPVAGFAGTVTAPYEVSDSDGNTAVSQVTVTVAAAPRAVPDV
VTTGQGTAVTIDPLANDVPSSTGATLDRSTLRLIDPSTGQPATSVVVPGQGTWAIGSDGR
VTFTPVASFSGTADPIRYRVTDTDGITTGSTITATVTETAPTAKNDTATSHGGPVTLDPL
GNDSAPSGHLVPSSLRLIDPSTGGLVTRLTIPGEGTYVVDTATGQVTFTPVASFSGTSTV
RYSVADTGGDRAVATLSVAVVLPPPTGITPNPGPGGGVTVTIPGGGQLAFTGSQLVWPPV
AVGTVLLLLGVTLIVLRRRRRGA
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtgaacacgagcgcggcgaactccgccgtcaccaacaccgccggggtcaccttc
acgaacccgatcaccggcgacaccgacacgtccaccacgcagaccacgtcgctcgacatc
gcgccggcagccgatctcgcgatcgccaagcggctcgacaccgatccggtcgtggccggg
cgtcctgtgtcgtacacgatcaccgcgtccaacaccgggccgcagaccggcaccggggtg
cgcatcgccgacaccgtaccggccggcctcaccggcgtcaccgcatccggggccggcgcc
acctgcgcgaccgcgtccggcaccatcacctgcaccgtccccgacctcgccgtcggcgcc
acccaggtcatcacggtgaccggcacggtgcccgccggcaccgacccgggcgcagggctc
tcgaatacggcgaccatctcgggttccctcgccgaccccgaccgctcgaacgacacggcg
tccgcatcgggaacggtcacgacctccgcagacctctcgatgacgaagaccctcactccc
gccgtcccggtcgcgggcgaccaggtgacctaccggctgacgtcgaccaactccggtccg
tccgacgctcgcgacgtgaccttcagcgatcctctcgatcctggcgtgacgttcgtgtcc
gccgccgtccccgacggaacctgctcggtcaccaccggcgtcgtgagctgcgacgtcggc
acgatcgcagcgggcgcgacggtcgccgcgacggtcgtggtccggctcgcagccgacgtg
aagatcgcgcagaacagcgcgacggtggcctcgtcgactcccgaccccaccccgggcgac
aacgtgtcctcggtcagcgtcgccgctgacaccgaagccgacctccgggtgacgaaggcc
gtcacgccgaccacggcgacggcgggcgacgacgtgacgtacacgctgcacgccctcaac
gccggcccgtcggacgccctcaacgccgtgctcgacgacacgctgccgaccggcatcacg
gtcaccgacgtccaggcgccgccgggagcgacgtgcggccaaccgacggacggttcgatc
cgctgccagtgggccaccctcgcctcgggggccgacgccaccgtgaccgtcaccgcgacc
gttgcggccgacgccccggccggtgcgctgacgaacacggcgagcatcgcctcgccgaca
cctgaccccgacaccgagaacaacgcggcgtcggtcgatgtcagcatcgagcagaacgcc
gacctgtcgctgacgaagacggccgatccggcgacagcggtcgcggggaagcccgtgacg
ttcacgatctcggcgacgaacgccgggccgtccgtttcgcgcggggtcgtgatcaccgat
cctctgccccgttccctcgtcgacgccgcctcgagcacgcccggctgcaccatcggcgac
gcggtcctcatctgtcaggtcggcgacatcgcgccaggagacacggcgaccgccctggtc
acggccaccgtcccctccgacggctccggcacgaacgtggtcaacacggcgcaggtcgcc
tcggcgacccccgactccgctgcgggcaacgactccgcgacggcgacggttcccgtcgag
gccagcgccgacctgtcggtgaccaagaccgcggcagacccgaccgtccggcagggccgc
tccgtgcagtacaccatcaccgtgcggaacgccggtccgtccgacgctcaggacgtcagc
gtgcaggatcagcccggcaccggcgtcgcgatcaccgcggcgacaccgtcggtcggcacc
tggaaccccgacagcctcgtgtggagcgtcggcaacctcgccgacggtgccaccgcgacc
ctccaggtcaccggacaggccacgatttcgggctcgctcacgaacgaggcgatcgaatcc
tccgtgaccccggaccccgacaccgccgaccagacggccaccgcgaccgtgacctcgacg
gccgtcaccccggcgtccgcctcgcccgacaccgccacggcgtcgttcgaccgcccggcg
accgcgaacgtcctggccaacgacactccgtcgaccggggcgaccttcgacgcttcgtcc
gttcggctccgcgacgacgccggcaaccccgtcgcgattctcgacgtgcccggcacgggg
cagtggtcggtcgacaccgccaccggcgaggtcacgttcacgcccgtcgccggattcgtc
ggaacggtcaccgtcccgtaccaggtgacggactccgacgggaccgtcgccgcgtcgacc
gtctccgccacgatcgccgggccgcccacctcccatgacgacaccgcaacgacagaccag
ggcgacgtggtgaccgtcccggtgctcgacaacgactcggcggacggaaccaccctcgat
cttgcgtctctccgtttcgtcgaccccgactccggggcgctggtgtccaccctgacggtt
cccgacgaaggcacgtactcgacgacgccgggcggggaggtcgtcttcacgccgctgccc
acgttctcggggacggcgacgcccgtgacctacagcgtcgccgacgacaacggggatcgc
tcgacggctcacctgacggtcacggtcgacgccgcccccgctccatccggtgtgaacgac
gccgtgagcgcggcctacaaccagccggtcaccttctctccgacctccaacgacgacacg
ggtgatcctggggccgccttcgatccgtcgtcggtgcgtctcatcgacccggcgtccggt
gatcccgtcaccgaggtcgtcgtcgccggccaggggacgtacgcggtcgacacctccaca
ggcctcgtcacgttcacgccgctcccgtcgttcaccggcgccgccactccggtcgcgtac
accgccacgaccacgttcggagcgaaggccggagccgacatcacggtcaccgtcggccgg
cccgacacgccgaccgccacggacgacgccggctacgcgccgaacggccgacccgtgccg
ttctcgcccctcgacaacgacaacgccgggcccgcgggcaccacgttcgacaccggatcg
ctccggctcatcgatccggcgaccggtgatcccgcgacgcgggtcgtcatcgccggcgaa
ggcacctggacggtcgacaccacgacgggcgcggtcgtgttcacccctgacgcccggttc
tccggcgccgccacgccgatcgactacaccgcttcgacgaacgtcggcgactcggtgacg
gggagcctcagcgcgtccgtcggcaccgccccgacagccgcgccggactcggcgacggtg
ccgtcgggccgtgcggcgagcgtccacgtactcgacaacgacgcccccggaggcacggcc
acgctcgacacgtcgagcgtccggctccgcgacgcgagcggcgccccggtgaccacgctc
gtcgtgccgggcaagggcacctggagcctcggcgccgacggtaccgtggtcttcaccccg
gtggccggcttcgcgggcacggtcacggcgccgtacgaggtcagcgacagcgacggcaac
acggccgtctcgcaggtcacggtgaccgtcgcggccgcgccgcgggccgtcccggacgtc
gtcacgacgggtcagggcaccgcggtgaccatcgacccgctcgcgaacgacgtgccgagc
agcaccggagcgaccctcgaccgctccaccctccgtctgatcgacccgagcaccgggcag
ccggcgacatcggtcgtcgtcccggggcagggcacctgggccatcggctcggacggccgc
gtgacgttcacccccgtcgcctcgttctcgggcacggccgaccctatccgctaccgggtg
accgacacggacggcatcacgaccggatcgacgatcaccgctaccgtcacggaaaccgcc
ccgacggccaagaacgacaccgcgacgtcgcacggcggcccggtgaccctcgaccccctc
ggcaacgactccgccccctcggggcacctcgtcccgtcgtcgttgcgcctgatcgacccg
agcaccggaggcctcgtcacgcggctcacgatccccggtgaaggcacctacgtcgtcgac
acggcgaccggtcaggtcaccttcacgccggtcgcgtcgttctcggggacgtcgacggtc
cggtactcggtggcggacaccggcggggatcgagcggtcgcgaccctcagcgtcgccgtg
gtcctgcccccgccgacgggcatcaccccgaatcccggcccgggcggcggcgtcaccgtc
acgatcccgggcggcgggcagctggccttcaccggctcgcagctggtctggccgccggtc
gcggtcggcaccgtcctgctccttctgggagtgacgttgatcgtcctccggcggcgccgc
cgaggagcctga
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