KEGG   Frondihabitans sucicola: GCM10025867_17590
Entry
GCM10025867_17590 CDS       T09158                                 
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
fsb  Frondihabitans sucicola
Pathway
fsb00061  Fatty acid biosynthesis
fsb00071  Fatty acid degradation
fsb01100  Metabolic pathways
fsb01212  Fatty acid metabolism
fsb02024  Quorum sensing
fsb04146  Peroxisome
Module
fsb_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:fsb00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    GCM10025867_17590
   00071 Fatty acid degradation
    GCM10025867_17590
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    GCM10025867_17590
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GCM10025867_17590
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:fsb01004]
    GCM10025867_17590
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fsb04147]
    GCM10025867_17590
Enzymes [BR:fsb01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     GCM10025867_17590
Lipid biosynthesis proteins [BR:fsb01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   GCM10025867_17590
Exosome [BR:fsb04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   GCM10025867_17590
  Exosomal proteins of breast cancer cells
   GCM10025867_17590
SSDB
Motif
Pfam: AMP-binding AMP-binding_C AMP-binding_C_2 DUF2007 AMP-binding_C_3
Other DBs
NCBI-ProteinID: BDZ49518
UniProt: A0ABN6Y0M2
LinkDB
Position
complement(1647193..1648530)
AA seq 445 aa
MYYAVLALGAVAVPIHALLKQHEIEYVLRDSGSTMLVCAAPLLAEGAPGAGLAGVDVVTV
LAPSDLVTGYDRLEALAEAAEPLDTYVPRDPFDTATILYTSGTTGQPKGAEGSHFALLEQ
VNVLLLSTFEMKAGDKVLGALPLFHTFGQTCTMNVAFRAGATVVMVPKFSGDAALQVMVE
QGCDIFMGVPTMYMALLDAATRSASRPTLKYAISGGAALPVAIIDRFRDVYGAEIHEGYG
LTETSPVATFNHVGRTPRPGTIGTPIWGVDVEIADSSVEDAIVLMPNGSIGELVIRGHNI
MNGYLNRPEDTARAIVDGWFRTGDLATKSDDGYLTIVDRTKDMIIRNGYNVYPRQVEEVL
AAHPDVTMAAVFGVPHETHGQEIEAAVVLRPDSTATPEELIAFVSDEIAAYKYPRVVHIV
DALPLGPSGKVLKRELVTRFAPAHA
NT seq 1338 nt   +upstreamnt  +downstreamnt
gtgtactacgcggtgctcgcgctcggagccgtcgctgttccgatccacgcgctcctgaag
cagcacgagatcgagtacgtcctccgcgacagcggttcgaccatgctggtctgcgcggcg
cccctcctggccgagggcgcaccgggagccggtctcgccggagtcgacgtcgtcacggtt
ctcgcgccgtccgacctggtgaccgggtacgaccggctcgaggcgctcgccgaagcggcc
gagccgctcgacacctacgtgccccgcgaccccttcgacacggccacgatcctctacacg
agcggcacgaccggtcagccgaagggcgcggagggctctcacttcgctctcctcgagcag
gtgaacgtcctcctgctgagcacgttcgagatgaaggccggcgacaaggtgctcggcgcc
ctcccgctgttccacacgttcggccagacctgcacgatgaacgtcgcgttccgcgccggc
gccacggtcgtcatggtcccgaagttcagcggcgacgcggcgctgcaggtgatggtggag
cagggctgcgacatcttcatgggtgtgcccacgatgtacatggcgctcctcgacgcggcc
acccgcagcgccagcaggccgaccctcaagtacgcgatctcgggcggcgccgctctgccg
gtggcgatcatcgaccgattccgcgatgtctacggcgccgagatccacgagggctacggc
ctcaccgagacgtcaccggtcgcgacgttcaaccacgtcggccggacgcctcgaccgggc
accatcggcacgccgatctggggtgtcgacgtcgagatcgccgactcgagcgtcgaggac
gcgatcgtcctgatgcccaacggatcgatcggcgagctcgtcatccgtgggcacaacatc
atgaacggctatctcaaccggccggaggacaccgctcgcgcgatcgtggacggctggttc
cgcaccggggacctcgcgacgaagtccgacgacggctacctcacgatcgtcgaccgcacc
aaggacatgatcatccgcaacggctacaacgtgtatccgcgccaggtcgaggaggtgctc
gccgctcacccggacgtcaccatggcggccgtgttcggcgtgccgcacgagacgcacgga
caggagatcgaggcggcggtcgtgctacgccccgactccaccgcgacccccgaagaactg
atcgcgttcgtcagcgacgagatcgccgcctacaagtacccccgcgtggtgcacatcgtc
gacgctcttcccctcggcccgagcggcaaggtgctcaagcgtgaactcgtgacgcgcttc
gctccggcgcacgcctga

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