Frondihabitans sucicola: GCM10025867_20950
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Entry
GCM10025867_20950 CDS
T09158
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fsb
Frondihabitans sucicola
Pathway
fsb03420
Nucleotide excision repair
fsb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GCM10025867_20950
03430 Mismatch repair
GCM10025867_20950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsb03400
]
GCM10025867_20950
Enzymes [BR:
fsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCM10025867_20950
DNA repair and recombination proteins [BR:
fsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GCM10025867_20950
MMR (mismatch excision repair)
Other MMR factors
GCM10025867_20950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
BDZ49854
LinkDB
All DBs
Position
1965458..1967170
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AA seq
570 aa
AA seq
DB search
MEAADLIAGLDEQQRLAAQTLLGPVCLLAGAGTGKTRAITHRIAYGVATGVYAPNRVMAL
TFTSRAAAELRGRLRALGAGGVSAKTFHAAALSQLSYFWPQTMGGTMPRLLDGKAKVVAH
AAETLRLRLDTASLRDLSAEIEWRKVSRLTLEEYAAALGSRKLPQNVTPEQAVDLHRAYE
DIKDSRKQLDFEDVLLVTAGMLELEPRVAQQVREQYRFFVVDEYQDVSPLQQDLLDLWLG
DRNDVCVVGDASQTIYSFAGASADFLLGFGSRYDDATVLRLEQNYRSARPIVETANELMR
GRPGALHLHPVAQTPGPQPRVTDYLSDSAEARAVAESIAAEIRGGALPEQIAVLVRVNVQ
VAALERALDDLGVSTRLHGAARFFDLREVKQALMMLKGAAVSIVGEPLFKTVSDVLRSLG
WTQEAPEQRGAVRDRWESLNALMGLAEQAPKDMTLREFVAELFARQAGQHEPTMSAVTLA
TLHSAKGLEWESVYIVGLSEGLVPISYAQTFEAVDEERRLLYVGITRARQRLHLSWSHQG
QGRGQADRRPSRFVEELRIRSRDEVGSSTA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
gtggaggccgccgatctgatcgctggcctcgacgagcagcagcgactcgccgcgcaaacc
ctcctcggcccggtctgtctgctggccggagcagggacgggcaagacccgcgccatcacc
caccgcatcgcctacggggtggcgaccggtgtctacgcgcccaaccgggtcatggctctg
accttcacgtcgcgcgccgctgctgaacttcgcggtcggctccgcgccctcggcgccggt
ggtgtctcggccaagacgttccacgcggccgccctgtcgcagctgtcgtatttctggccg
cagacgatgggcggcaccatgccgcgccttctcgacggcaaggcgaaggtcgtcgcgcac
gcggccgagacgcttcgattgcgactcgacaccgccagtcttcgagatctgtcggccgag
atcgaatggcgtaaggtctcgcgcctgaccctcgaggagtacgcggccgccctcggctcg
cggaaactgccgcagaacgtcacccccgagcaggcggtcgatctgcaccgcgcctacgaa
gacatcaaggacagccgtaagcagctcgacttcgaggacgtcctgctcgtcacggcgggc
atgctcgaactcgagccacgcgtcgctcaacaggtgcgcgagcagtaccggttcttcgtc
gtcgacgagtatcaggacgtctctcctctgcagcaggatctcctcgacctctggctcgga
gatcgaaacgatgtgtgcgtcgtcggcgacgcgagccagaccatctactcgttcgcgggg
gcgtcggccgacttcttgctcggcttcggatctcggtacgacgacgcgacagtgctccgc
ctcgaacagaactaccggtcggccaggccgatcgtcgagacggccaacgagctgatgcgg
gggcgcccgggagcgctgcacctgcatccggttgcgcagacacccgggccgcaaccgcgc
gtgaccgactacctctcggactcggccgaggcgcgggccgtcgcggagagcatcgcggcg
gagattcgcggcggggccctgcccgagcagatcgccgttctcgttcgcgtcaacgtccag
gtcgcagcgctggagcgcgccctcgacgatctcggcgtgagtacgcgtctgcacggcgcc
gcgagattcttcgacctccgcgaggtcaaacaagccctgatgatgctcaagggggccgcc
gtcagcatcgtcggcgaaccgttgttcaaaacggtgagcgacgtgctgcgctcgctgggc
tggacgcaggaggcgccggagcagcgcggtgccgtgcgcgatcgctgggagtcgctgaac
gcactgatgggccttgccgagcaagccccgaaagacatgacccttcgcgagttcgtcgcc
gaactgttcgcgcgccaggcggggcaacacgaacccaccatgtctgcggtgacgctggcg
acactgcattccgccaaggggctcgaatgggagagcgtctacatcgtgggtctcagcgaa
gggctcgtgccgatcagctacgcgcagaccttcgaggcggtcgacgaagagcggcgcctt
ctctacgtcgggatcacgcgggcacggcaacgcctgcacctgtcgtggagccaccagggg
caggggcgagggcaggcggatcgccgaccgagtcgcttcgtggaagagctgcgcatccgc
agtcgggatgaggtcggctcgtcgaccgcgtga
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