Frondihabitans sucicola: GCM10025867_21600
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Entry
GCM10025867_21600 CDS
T09158
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fsb
Frondihabitans sucicola
Pathway
fsb00061
Fatty acid biosynthesis
fsb00071
Fatty acid degradation
fsb01100
Metabolic pathways
fsb01212
Fatty acid metabolism
fsb02024
Quorum sensing
fsb04146
Peroxisome
Module
fsb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GCM10025867_21600
00071 Fatty acid degradation
GCM10025867_21600
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GCM10025867_21600
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM10025867_21600
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fsb01004
]
GCM10025867_21600
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fsb04147
]
GCM10025867_21600
Enzymes [BR:
fsb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GCM10025867_21600
Lipid biosynthesis proteins [BR:
fsb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GCM10025867_21600
Exosome [BR:
fsb04147
]
Exosomal proteins
Exosomal proteins of breast milk
GCM10025867_21600
Exosomal proteins of breast cancer cells
GCM10025867_21600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BDZ49919
UniProt:
A0ABN6XXZ6
LinkDB
All DBs
Position
complement(2021921..2023624)
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AA seq
567 aa
AA seq
DB search
MSDDHEHPWLASYADDVPAEIEPVTGTLVDLIDEAAQQYRSHTALEFFGRGTSYDVLHDR
IERVAEGLRRLGVGHGDRVALLLPNCPQHVIAFYAILRLGAVVVEHNPLYTDRELRHLFE
DHGATVAIAWDKLVDRLAEMPKDIRFTSIVSVDITREMPASKRFALRLPLKRAQDARSAL
TTKVTRHRGLHVVAWRDVVRSRLLLADHERPSLDDTALLQYTSGTTGAPKGAILSHRNLR
SNVEQGRAWVPGLADGSETIYGVLPFFHAYGLTLCLTFAMRIGARLVLFPKFDVDLVLAA
AKKHPPTFLPAVPPIYQRLAEAATKRKVDLSAVRFAISGAMNLPASVVHAWEEVSGGLLV
EGFGLTETSPVALGNPVGPSRRPGTVGVPFPSTEARVVDREHPENEVAPGEPGELLLRGP
QIFQGYWRRPDETALVFLEGGWFRTGDIVAMSADGFVTIVDRIKELIVTGGFNVAPSEVE
EAVLGIAGVAEVAVVGIPREAGGEDVAAAVVLKAGARFDEAAARAHCKEHLAAYKVPKRF
VVVDELPKNLIGKTLRRKVRESLIAAS
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgaccacgaacatccctggctcgcgagctacgcggacgacgtccccgccgag
atcgaacccgtcaccggcactctggtcgacctcatcgacgaggccgcccagcagtatcgc
tcgcacaccgcgctggagttcttcgggcgcggaaccagctacgacgtcctgcacgatcgc
atcgagcgcgtcgccgagggcctgcgccggctcggcgtcgggcacggcgaccgcgtggcg
ctcctcctgcccaactgcccgcagcacgtgatcgcgttctacgcgatcctccgcctggga
gcggtcgtcgtcgaacacaacccgctgtacaccgatcgagagctgcgccacctgttcgag
gaccacggcgccaccgtcgccatcgcctgggacaagctcgtcgatcgcctcgccgagatg
cccaaagacatccgcttcacctccatcgtcagcgtcgacatcacccgggagatgcccgcg
agcaagaggttcgccctgcggctgccgctgaagcgagcgcaggatgccaggtccgccctg
accacgaaggtcaccaggcaccgcggcctccacgtcgtcgcgtggcgcgacgtcgtccgc
tcacggctcctcctcgccgaccacgagcgcccgtccctcgacgacacggcgctgctgcag
tacaccagcggcacgaccggcgcgccgaagggcgcgatcctgagccaccggaacctgcgg
agcaacgtcgagcaggggcgcgcctgggttcccggcctcgcggacgggagcgagacgatc
tacggcgtgctgccgttcttccacgcgtacggactcaccctctgcctcacgttcgccatg
cggatcggcgcgcgactggtgctgttcccgaagttcgacgtcgatctcgtgctcgccgcc
gcgaagaagcatccgccgaccttcctcccggccgtgccgccgatctaccagcgcctcgcc
gaggccgccacgaagcggaaggtcgacctgtcggccgttcgcttcgcgatctcgggtgcc
atgaatctccccgcgtcggtcgtccacgcctgggaagaggtgtccggcgggctcctcgtc
gaagggttcgggctcacggagacgtcgccggtggcgctgggcaacccggtgggcccgtcg
cgtcgacccggcaccgtgggtgtgccgttcccgtcgaccgaggccagggtggtggaccgc
gagcaccccgagaacgaggtcgccccgggcgagccgggcgagttgctgctccgcggcccg
cagatcttccaggggtactggcgccggccggacgagacggcgctcgtcttcctcgagggc
ggctggttccgcacgggcgacatcgtggccatgagcgccgacggcttcgtcacgatcgtc
gaccgcatcaaggaactcatcgtgaccggcgggttcaacgtggcgccgtcggaggtggag
gaggccgtcctcggcatcgccggagtcgccgaggtggccgtcgtcggcatcccgcgcgag
gccggcggagaagacgtcgccgcggccgtggtgctgaaagccggcgcccgtttcgacgag
gcggcggcccgggctcactgcaaggagcacctggccgcctacaaggtgcccaagcgcttc
gtcgtggtcgacgagctgccgaagaacctcatcggaaagacgctgaggagaaaggtgcgg
gagtcgctcatcgccgcatcgtga
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