Frondihabitans sucicola: GCM10025867_22530
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Entry
GCM10025867_22530 CDS
T09158
Name
(GenBank) hypothetical protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
fsb
Frondihabitans sucicola
Pathway
fsb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM10025867_22530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fsb02000
]
GCM10025867_22530
Transporters [BR:
fsb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
GCM10025867_22530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF2167
Motif
Other DBs
NCBI-ProteinID:
BDZ50012
LinkDB
All DBs
Position
complement(2107476..2108543)
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AA seq
355 aa
AA seq
DB search
MRVPVGTGPFKVTKWVKQSAITMVRNTKYTSPPQDAAHKGTAYLSKITWRFIPDSASRYA
ALQAGQVDVIDNAQPDTLVAAAKSSQLKAIDAPRPGASDRLELNSSQAPFNDERVREAFI
TGVDVNAGITSLFFGTAKRSYSLLSSIEKDGYSDKSLFSIDKKRSNDLLNEAGWTTRDSS
GYRTKDGKRLTVRFPVSTNQSIPAERSLFEQIQAEAKTLGFDVEISQLDLSSWYGALAAH
KYEIVSAPYTKVGPGVLDILYDSSSIKPAPSGYFANNAQVNDPKLDALLKQAGEESNQSK
RKDLYDQAQKIVLAGYYVLPLYDQQNHYLYRTSVHGLRATPTVSTPTLYDTWLSK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
ttgcgagtccccgtcggcaccgggccgttcaaggtcaccaagtgggtgaagcagagcgcc
atcacgatggtgcgcaacacgaaatacacctcgcctccgcaggacgccgctcacaagggc
accgcttacctgtcgaagatcacctggcgcttcatccccgactcggcgtcgcgctacgcc
gcactccaggccgggcaggtcgacgtgatcgacaacgcgcagcccgacactctcgtcgcc
gcggcgaagagcagccagctcaaagccatcgacgccccgaggcccggcgcctcggaccgg
ctcgaactcaactcctcgcaggcgccgttcaacgacgaacgcgtccgcgaggccttcatc
acgggtgtcgacgtcaacgcggggatcacgagcctgttcttcggtaccgccaagcggtcg
tactccctgctctccagcatcgagaaagacggctacagcgacaagagcctcttctcgatc
gacaagaagcgctcgaacgacctcctgaatgaggccggctggacgacacgcgactcgagc
ggctaccgcaccaaagacggcaagcgcctcaccgtccgcttcccggtgagcaccaaccag
tcgatccccgccgagcgttccctcttcgagcagatccaggcggaggccaagaccctcggc
ttcgacgtcgagatctcgcagctcgacctgtcgagctggtacggcgccctcgccgcccat
aagtacgagatcgtgagcgcgccgtacacgaaggtcggcccgggcgtcctcgacatcctc
tacgactcctcgagcatcaagcccgcgccgtccggctacttcgccaacaacgcgcaggtg
aacgacccgaagctcgacgcgctcctgaagcaggcgggcgaggagtcgaaccagtcgaaa
cgcaaggacctctacgaccaggcgcagaagatcgtgcttgccggctactacgtcctgccg
ctctacgaccagcagaaccactacctgtaccggacctcggtgcacgggctgcgagcgacg
ccgaccgtgtcgacgccgacgctctacgacacgtggctgtcgaagtga
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