Frondihabitans sucicola: GCM10025867_26780
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Entry
GCM10025867_26780 CDS
T09158
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
fsb
Frondihabitans sucicola
Pathway
fsb00470
D-Amino acid metabolism
fsb00550
Peptidoglycan biosynthesis
fsb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GCM10025867_26780 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GCM10025867_26780 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fsb01011
]
GCM10025867_26780 (murD)
Enzymes [BR:
fsb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
GCM10025867_26780 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
fsb01011
]
Precursor biosynthesis
Amino acid ligase
GCM10025867_26780 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
TrkA_N
2-Hacid_dh_C
NAD_binding_7
F420_oxidored
YuA_Gp49
Pyr_redox_2
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
BDZ50437
UniProt:
A0ABN6XZG1
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All DBs
Position
2496650..2498182
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AA seq
510 aa
AA seq
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MSDSRLDTLTSWHADWKGLRVGVLGLGVTGFSVADTLCELGAEVLVVAPDDSSDAARLLP
VIGARLVVQSDLTTPPAELIDFDADVIVVSPGFAPHHPLIVWASSTRAAVWGDVELAWRV
RDKTGRIAEWVLITGTNGKTTTTQLAAAMFAADERTVAACGNIGLPVLDAIREPDGFDVL
VVELSSHQLHYLPIEGPGALHPAASACLNVEDDHLEWHGGADAYRAAKGRVYANTRIACV
YNRADATTQRLVHEADVIEGCRAIGFGVDAPPVSDVGVVEGLLVDRAFLDDRRHRALELT
TLETLESSGLDAPHLVEDVLAAAALARALDVPPDAIHLAVAAFRADHHRSEVVATADGIS
WIDDSKATNPHAARASLLAAGPVVWIVGGLFKGVDVAPLVRDDTSAVKAAVFIGQDRQML
REAFRRHAPGIPVFEVDETDTERVMPQAVTLAAAIATAGDTVLLAPAAASFDQFADYGAR
GDAFARAVHDHLGGDADGRHTIEPPATPER
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactctcgactcgacaccctcacgagctggcacgccgactggaagggccttcgc
gtcggggtcctcggtctcggcgtgaccgggttctcggtcgccgacacgctctgtgagctc
ggcgccgaggttctggtggtcgcgcccgacgattcgtccgacgctgcccggcttctcccg
gtcatcggcgcgcgactcgtcgtgcagtccgacctgaccactccgcccgccgagctgatc
gatttcgacgcggacgtgatcgtggtgagccccggcttcgcgccgcatcacccgctgatc
gtctgggcgtcctccacgcgggcagcggtctggggcgacgtcgagctggcctggcgcgtc
cgcgacaagaccggcaggatcgccgagtgggtgctcatcaccggcaccaacggcaagacc
acgacgacgcaactggcggcagccatgttcgcggccgacgagcgcaccgtggcggcctgc
ggcaacatcggcctgcccgtgctcgacgccatccgcgaacccgacggcttcgacgtcctg
gtcgtcgagctctccagccaccagctgcactacctgccgatcgaagggcccggtgccctg
catcctgccgcgtcggcctgcctcaacgtcgaggacgaccacctcgagtggcacggtgga
gccgatgcctatcgcgccgcgaagggccgggtctacgcgaacacgcgcatcgcctgcgtg
tacaaccgcgcggacgccaccacgcagcgcctcgtgcacgaagcggacgtcatcgaaggc
tgccgagccatcggcttcggcgtcgatgcgcctccggtcagcgacgtcggcgtcgtcgaa
gggcttctcgtcgatcgagcgttcctcgacgaccgccgccatcgcgcgctcgagctcacg
acgctcgagaccctggagtcctccgggctcgacgcgccgcacctcgtcgaagacgttctg
gcggcggcggctctcgcccgggccctcgacgtgccgccggacgcgatccacctggccgtc
gccgccttccgtgccgaccaccaccgctccgaggtcgtcgcgacggccgacggcatctcc
tggatcgacgactcgaaggccaccaacccccatgccgcacgggcttcgctgctcgccgcg
ggcccggtcgtctggatcgtcggcggtctcttcaagggcgtcgacgtcgcgccgctcgtg
cgagacgacacctccgccgtcaaggcggccgtgttcatcgggcaggatcggcaaatgctc
agggaagccttccggcgacacgcgcccggcatacccgtcttcgaggtcgacgagaccgac
actgaacgggtgatgccgcaggccgtgacgttggcggccgcgatcgccactgcaggagac
accgtcctgctggcgcccgcagcggcatcgttcgatcagttcgccgactacggcgcccgg
ggagacgctttcgcccgggccgtccacgaccacctgggaggtgacgccgatggccgacac
accatcgagcctcccgcgacgcctgagcgctaa
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