Frondihabitans sucicola: GCM10025867_28190
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Entry
GCM10025867_28190 CDS
T09158
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fsb
Frondihabitans sucicola
Pathway
fsb03030
DNA replication
fsb03430
Mismatch repair
fsb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCM10025867_28190
03430 Mismatch repair
GCM10025867_28190
03440 Homologous recombination
GCM10025867_28190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsb03032
]
GCM10025867_28190
03400 DNA repair and recombination proteins [BR:
fsb03400
]
GCM10025867_28190
Enzymes [BR:
fsb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCM10025867_28190
DNA replication proteins [BR:
fsb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCM10025867_28190
DNA repair and recombination proteins [BR:
fsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCM10025867_28190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Tenui_N
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
BDZ50578
UniProt:
A0ABM8GQ77
LinkDB
All DBs
Position
2618642..2619358
Genome browser
AA seq
238 aa
AA seq
DB search
MGPVPVSWWDGLGVFDLETTGIDVETARIVTAHVGLIDSTGASIAHGEWLADPGVDIPVQ
ASAVHGITTEQAQAEGRPAPEVVAEIIAAVQAVFTRGVPLVIYNAPYDLTVLDREARRYG
LEPLVVEAGWVVDPLVIDKAVDKYRKGKRTLEAAAEFYEVVLDDAHNAGADAIAAGRVAQ
AMAKRHLDKLDLPAADLHTLQVGWCAEQAASFQEYMRRKDPTFTAAGDWPARPSPIVG
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
gtgggcccggttcccgtctcctggtgggacggcctcggcgtcttcgacctcgagacgacc
ggcatcgacgtcgagaccgcgcgtatcgtgacggcgcacgtcggcctcatcgactcgacc
ggcgcgtcgatcgcccacggcgagtggttggccgatcccggtgtcgacatcccggtgcag
gcgtcggcggtgcacggcatcaccaccgagcaggcgcaggccgaagggcgcccggctccc
gaggtcgtcgccgagatcatcgcggccgttcaggccgtcttcacccgcggcgtgccgctc
gtcatctacaacgccccgtacgacctcaccgtcctcgaccgcgaggcccgccgttacggc
ctcgagccgctcgtggtcgaggccggctgggtcgtcgacccactcgtcatcgacaaggcg
gtcgacaagtaccgcaagggcaagcgcaccctcgaggccgccgccgagttctacgaggtc
gtgctcgacgacgcgcacaacgccggtgccgacgccattgcggccggtcgcgtcgcacag
gccatggcgaagcggcacctcgacaagctcgaccttcccgccgccgacctgcacaccctc
caggtggggtggtgcgccgagcaggccgcctccttccaggagtacatgcggcgcaaagac
ccgaccttcaccgccgccggcgactggcccgcccgccctagcccgatcgtcggctga
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