Frondihabitans sucicola: GCM10025867_29420
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Entry
GCM10025867_29420 CDS
T09158
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
fsb
Frondihabitans sucicola
Pathway
fsb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GCM10025867_29420 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsb03400
]
GCM10025867_29420 (ruvB)
Enzymes [BR:
fsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCM10025867_29420 (ruvB)
DNA repair and recombination proteins [BR:
fsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GCM10025867_29420 (ruvB)
RecFOR pathway proteins
GCM10025867_29420 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
MCM
nSTAND3
Sigma54_activ_2
Zeta_toxin
AAA_14
AAA_3
IstB_IS21
DUF815
AAA_25
NB-ARC
AAA_18
NTPase_1
AAA_24
NACHT
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
BDZ50701
LinkDB
All DBs
Position
complement(2737377..2738399)
Genome browser
AA seq
340 aa
AA seq
DB search
MSDDLTRPDLESEAELAFEGALRPKSLTEFVGQTKVRGQLELLLRAAAMQGRTPDHVLLA
GPPGLGKTTLAMIVAHEGNRPLRMSSGPAIQHAGDLAAVLSSLVPGEVLFIDEIHRMARS
AEEMLYLAMEDFRIDIMVGKGAGATSIPLELSPFTLVGATTRSGLLPNPLRDRFGFTAHL
EFYDEPELEEVLRRAAALIEVDIDRDALAEIAGRCRGTPRIANRLLRRVRDYALVHGLRA
DLATVRAALDLYDVDSLGLDRLDRSVVETILKRFDGGPVGLNTLAVSVGEEADTIESVVE
PFLVRVGLLTRTPRGRIATPEAWRHFGLQRRSGGLFDDGL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgacctcacccgccccgacctcgagtccgaggccgaactcgccttcgaagga
gcgctccggcccaagtcgctgaccgagttcgtcggacagaccaaggtgcgcgggcagctc
gagctgctcctccgcgcggcagccatgcagggccggacccccgaccacgtcctcctcgcc
ggcccgcccggcctcggcaagacgaccctcgccatgatcgtcgcccacgagggcaatcga
ccgcttcggatgtcctccgggcccgccatccagcacgccggcgacctcgcggccgtcctg
tcctcgctcgttcccggcgaggtcctcttcatcgacgagatccaccggatggcccggtcg
gccgaagagatgctctacctggcgatggaagacttccggatcgacatcatggtcggcaag
ggggcgggcgccaccagcatcccgctcgaactctcgccgttcacactggtcggcgcgacc
acgcgatcgggtctcctcccgaacccgctgcgcgaccgcttcgggttcacggcgcacctc
gagttctacgacgagcccgaactcgaggaggtcctgcgacgcgccgccgccctgatcgag
gtcgacatcgaccgcgacgccctcgccgagatcgccggccggtgccgcggaacaccgcga
atcgccaaccggctgctccggcgggtccgcgactacgcgctcgtccacgggctgcgcgcc
gacctcgcgaccgtgcgagccgccctcgatctctacgacgtcgactccctcgggctcgac
cgtctcgaccgctccgtcgtcgagacgatcctgaaacgcttcgacggcggccccgtcggt
ctcaacacgctcgccgtctcggtcggagaggaggccgacacgatcgaatccgtggtcgag
ccgttcctggtccgagtcggtctcctgacccggacgccccgaggcaggatcgcgacgccg
gaggcctggcggcacttcggcctccagcgacgctcaggagggctgttcgacgatggccta
taa
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