Frondihabitans sucicola: GCM10025867_29490
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Entry
GCM10025867_29490 CDS
T09158
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
fsb
Frondihabitans sucicola
Pathway
fsb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GCM10025867_29490 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fsb01007
]
GCM10025867_29490 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fsb03016
]
GCM10025867_29490 (thrS)
Enzymes [BR:
fsb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
GCM10025867_29490 (thrS)
Amino acid related enzymes [BR:
fsb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
GCM10025867_29490 (thrS)
Transfer RNA biogenesis [BR:
fsb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
GCM10025867_29490 (thrS)
Prokaryotic type
GCM10025867_29490 (thrS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
DUF932
Motif
Other DBs
NCBI-ProteinID:
BDZ50708
UniProt:
A0ABM8GQH1
LinkDB
All DBs
Position
complement(2742522..2744558)
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AA seq
678 aa
AA seq
DB search
MSDAVNPVPTPPEAREVTEATTGFELFPDRAVVAVRVDGALFDMAATFEPGTWAEPVLID
SPQGLEILRHSTAHVMAQAVQTINPEAKLGIGPPINDGFYFDFDVEEPFTPDSLKAIEKG
MERIIKANQRFVRRVVDEAEARELMANEPYKLELIGLKGGSELAENAGDAGLSLSDDSAV
EVGGAELTVYENVDAKTGEVVWRDLCRGPHLPSTRLIQNGWKLQRSAAAYWRGSEKNTSL
QRIYGTAWATKEALREHLERLEEAAKRDHRKLGAELDLFSFPDELGSGLAVFHPKGGIIR
REMEDYSRKRHEAEGYDFVYTPHITKSNLYETSGHLQWYKDGMFPAMHLDEARNEEGDIV
RQGADYYLKPMNCPMHILVYRSQGRSYRDLPMRLFEFGAVYRNEKSGVIHGLTRVRGMTQ
DDAHIFTARDQMAAELKNTLSFVLSLLKDYGLDDFYLELSTKDPEKYVGDDATWEEATAT
LEQVARETGLELVPDPAGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFELEYTAA
DGTHQRPVMIHRALFGTVERFFGVLTEHYAGAFPVWLAPVQVVGIPVADEYGDYLDEIGA
QLRARGVRVQIDHGNDRMPKKIRTHTKQKVPFQLIAGEEDRAAGSVSFRYRDGSQENGVP
IADAIEKIVTAIETKAQV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagacgccgtaaaccccgtgcccactccgccagaagcgcgagaggtcaccgaggcc
acgacgggcttcgagctcttcccggaccgcgccgtggtggcggttcgcgtcgacggtgcg
ctgttcgacatggcggcgaccttcgaaccgggcacctgggccgagccggtcctgatcgac
tcgccgcagggtctcgagatcctgcgccactcgaccgcacacgtcatggcacaggctgtc
cagaccatcaatcccgaggccaagctcggcatcggcccgccgatcaacgacggcttctac
ttcgacttcgatgtcgaggagcccttcacccccgacagcctcaaggcgatcgagaagggc
atggagcgcatcatcaaggcgaaccagcgcttcgtgcgccgcgtcgtcgacgaggccgag
gctcgcgagctgatggcgaacgagccgtacaagctcgaactgatcggcctcaagggcggc
agcgagctggcggagaacgccggcgacgccgggctgagcctgtcggacgactcggcggtc
gaagtgggcggcgccgagctcaccgtctacgaaaacgtcgacgccaagaccggagaggtc
gtctggcgcgacctctgccgcggcccgcacctgccctcgacccgcctgatccagaacggc
tggaagctgcagcgctcggcagccgcctactggcgcggctcggagaagaacacgtcgctc
cagcgcatctacggcaccgcctgggccaccaaggaggccctgcgcgagcacctcgagcgc
ctggaggaggccgccaagcgcgaccaccgcaagctcggcgccgagctcgacctgttctcg
ttccccgacgagctgggcagcggtctggccgtcttccaccccaagggcggcatcatccgc
cgcgagatggaagactattcgcgcaagcgccacgaagccgagggctacgacttcgtctac
acgccgcacatcaccaagtcgaacctctacgagacctctggccacctccagtggtacaaa
gacggcatgttcccggcgatgcacctcgacgaggcgcgcaacgaggagggcgacatcgtc
cgccagggcgccgactactatctcaaaccgatgaactgcccgatgcacatcctcgtgtat
cggtcgcagggccggtcctaccgtgacctgccgatgcgcctgttcgagttcggcgccgtg
taccgcaacgagaagtccggcgtgatccacggcctgacccgggtgcgcggcatgacccag
gacgacgcccacatcttcaccgctcgcgaccagatggccgccgagctcaagaacaccctg
tcgttcgtcctgtccctcttgaaagactacggtctcgacgacttctacctcgaactgtcc
acgaaagatcccgagaagtacgtcggcgacgacgcgacgtgggaggaagccactgcgacc
ctcgagcaggtcgcgcgagagaccgggctcgaactggtccccgatcctgccggcgcagcc
ttctacggcccgaagatctcggtccaggcccgcgacgcgatcggccgaacctggcagatg
tcgacggtgcagctcgacttcaacctgcccgagcgcttcgagctcgagtacaccgctgcc
gacggcacgcaccagcgtcccgtcatgatccaccgcgcgctcttcggcacggtcgagcgc
ttcttcggcgtgctcaccgagcactacgccggtgcgttcccggtctggctcgcgccggtc
caggtcgtcggcatccccgtcgccgacgagtacggcgactatctcgacgagatcggcgcc
cagctgcgcgcccgtggcgtgcgcgtccagatcgaccacggcaacgaccgcatgccgaag
aagatccgcacgcacacgaagcagaaggtgcccttccagctcatcgccggcgaagaagac
cgcgctgccggttcggtcagcttccgctaccgcgacgggtcgcaggagaacggcgtcccg
atcgccgacgcgatcgagaagatcgtcaccgcgatcgagaccaaggctcaggtctga
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