Frondihabitans sucicola: GCM10025867_32350
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Entry
GCM10025867_32350 CDS
T09158
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fsb
Frondihabitans sucicola
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fsb03016
]
GCM10025867_32350 (truB)
Enzymes [BR:
fsb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GCM10025867_32350 (truB)
Transfer RNA biogenesis [BR:
fsb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GCM10025867_32350 (truB)
Prokaryotic type
GCM10025867_32350 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
DUF7595
NAD_binding_3
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BDZ50994
LinkDB
All DBs
Position
complement(3011316..3012281)
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AA seq
321 aa
AA seq
DB search
MTGTRRPAPAIRLAGAELGWVLVNSGILLVDKPQGITSHDVVSRVRKAAGTRKVGHAGTL
DPMATGLLVTGINSSTRLLTFLVGLDKTYAATIRLGVSTASDDADGEVVTVTDASSVDEP
SLLRGIEALTGDILQVPTTVSAIKVDGKRAYALAREGVEVELTARPVTVTRFELLARRDV
VVDGSAVVDLDVIVDCTSGTYVRALARDLGGGLGVGGHLTALRRTRIGPFDVADAAELEG
VDVAAHLLPPSGVARRLFDVFEMTAQQTIDLGHGKKLPVVRSDDPGPIAAITPDGRLAGL
VSVTRGIVRPIVNFPTDEVSS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggcacccgacgcccggcacccgccatcaggctcgccggggctgaactaggctgg
gtgctcgtgaacagcggcatccttctcgtcgacaagccgcagggcatcaccagtcacgac
gtcgtctcccgggtccgcaaggcggccgggactcgcaaggtgggccacgccggcacactc
gacccgatggcgacggggctgctggtgacggggatcaactcgtcgacgcgcctgctcacg
ttcctggtcggcctcgacaagacgtacgcggcgacgatccgactcggggtctcgacggcg
agcgacgacgccgacggcgaggtcgtgacggtgacggacgcgtcctcggtcgacgagccg
agcctcctgcgcggcatcgaggctctgacgggcgacatcctccaggtgccgacgaccgtg
agcgccatcaaggtcgacggcaagcgcgcctacgccctcgcccgtgagggcgtggaggtc
gagctcacggcccggccggtgaccgtgacgagattcgagctgctggcacgccgcgacgtc
gtggtcgacggttccgctgtcgtcgacctcgacgtgatcgtcgactgcacgtcaggaacg
tacgttcgcgcactcgctcgcgatttgggcggcggactgggtgtcggcgggcacctcacg
gcgctccgccgcacccggatcggtccgttcgacgtggccgacgcggccgaactcgagggt
gtcgacgtggccgcgcacctgctgccgccctccggcgtcgctcgtcgcctgttcgacgtg
ttcgagatgacggcgcagcagacgatcgatctggggcacggcaagaagctcccggtcgtg
cgttcggacgaccccgggccgatcgccgcgatcactcccgacggccggctcgccggactc
gtgtcggtcacccgaggcatcgtccgtcccatcgtcaacttcccaacggatgaggtctct
tcgtga
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integrated database retrieval system
