Frondihabitans sucicola: GCM10025867_35410
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Entry
GCM10025867_35410 CDS
T09158
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
fsb
Frondihabitans sucicola
Pathway
fsb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM10025867_35410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fsb02000
]
GCM10025867_35410
Transporters [BR:
fsb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
GCM10025867_35410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BDZ51300
LinkDB
All DBs
Position
complement(3299711..3301333)
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AA seq
540 aa
AA seq
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MRIRTRAAIGLAAAATVALALTGCSSGGSSDTAGSSGSVTNGGNLTFAIANDPISLNPSG
TGSGNDTLYVTRQLVDSLLYQDPKTGDLKPWLASSYTVNSDATKFTFTLRSGVTFSDGTK
FDASAVKATFDDIVAAGAKSTAVSSLVGYTGSTVVDPSTVEVDFSKPNAAFPQATSSVGL
GIVSVGTTKIPYDDRSTGKGVVGTGPFTLKSYSPNVKTVLTKRKDYDWGPADRSNTGAAH
LASVTFQVVPEASVRSGSLSSGQVDVIGSVQPTDVDTLKGGGYPLVTRTNPGLAFGFSFN
EARPIVKDEKVREAIAHALDSKTIRDTSLNSLFPVGTSALASTTPGYKNESSFFEYDLAS
AKKLLTDDGWKVGADGIRVKDGTKLSLKVAWITNFSPNQTTLELAQQELKKAGIAITLQS
STVPDFLKTLTSGNYDLQFGNNSRADGDILRTSFSTAATNYSHLDDPTLEALLQKQQATP
DVKEREAVIGDIQTRLASQYHEIPVHELTTILATAKGVTGVTLGADSRLDQLTGASTTAK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcagaacccgggccgccatcggcctcgccgcagcagccaccgtcgccctagcc
ctgaccggctgctcctcgggcggctcgtcggacaccgccggctcctcgggctcggtgacg
aacggcgggaacctcaccttcgccatcgcgaacgacccgatctcgctcaacccgtccggg
acgggatccggaaacgacacgctctacgtgacgcgccagctcgtcgactcgctgctctac
caggaccccaagaccggtgacctgaagccgtggctcgcgagctcgtacaccgtcaactcg
gatgcgacgaagttcacgttcacgctgcgctcgggcgtgaccttctcggacggcacgaaa
ttcgacgcctcggccgtcaaggccactttcgacgacatcgtcgccgccggggcgaagagc
acggccgtgagctccctggtcggctacaccgggtcgacagtcgtcgacccgtcgaccgtc
gaggtcgatttctcgaagcccaacgccgcgttcccgcaggccacctcgtccgtgggcctc
ggcatcgtgtccgtcggcaccaccaagatcccctacgacgaccgctccaccggcaagggc
gtcgtcggcaccggaccgttcacgctgaagagctactcgccgaacgtcaagaccgtcctg
acgaagcggaaggactacgactggggccccgccgaccgttcgaacaccggagcggcccat
ctggcgtcggtcaccttccaggtcgtccccgaggcgagcgtgcgatccgggagcctgtcg
tccgggcaggtcgatgtgatcggctccgtccagccgaccgacgtcgacaccctcaaggga
ggcggctacccgctggtcacgcgcacgaaccccggtctggcgttcggcttctccttcaac
gaggcgcgtcccatcgtgaaggacgagaaggtgcgcgaggcgatcgcccacgcactcgac
tcgaagacgatccgcgacacctcgctcaactccctgttcccggtcggcaccagcgcgctg
gcctcgacgacgcccgggtacaagaacgagagcagcttcttcgagtacgacctcgcgtcg
gcgaagaagctcctcacggacgacggctggaaggtcggcgcggacggcatccgcgtcaag
gacggcacgaagctctcgctcaaggtggcctggatcaccaacttcagccccaaccagacg
accctggagctcgctcagcaggagctgaagaaggccgggatcgcgatcacgctgcagagc
agcacggtccccgacttcctcaagacgctgacctcgggcaactacgacctccagttcggc
aacaactcgcgcgccgacggcgacatcctgcgcacgtcgttctcgacggcggccaccaac
tattcccacctcgacgacccgaccctggaagcgctcctgcagaaacagcaggcgactccg
gacgtgaaggagcgtgaggcggtgatcggtgacatccagacgcgcctcgccagccagtac
cacgagattccggtccacgagctgacgacgatcctggcgaccgcgaagggcgtcacggga
gtcaccctcggcgccgacagccgcctcgaccagctcaccggcgcctcgacgacggcgaag
tga
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