Frondihabitans sucicola: GCM10025867_36870
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Entry
GCM10025867_36870 CDS
T09158
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
fsb
Frondihabitans sucicola
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fsb03000
]
GCM10025867_36870
Transcription factors [BR:
fsb03000
]
Prokaryotic type
Helix-turn-helix
LacI family
GCM10025867_36870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
TetR_N
MarR_2
HTH_3
HTH_Crp_2
HTH_31
Xre-like-HTH
AbiEi_4
HTH_10
Motif
Other DBs
NCBI-ProteinID:
BDZ51446
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Position
complement(3427116..3428174)
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AA seq
352 aa
AA seq
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MKNDDSVPEAGAVVVPDKSHVTTRDIAAAAGVSQATVSNALNRPDLVAPATLERIEAVMR
KTGFVVNSFARGLRMGRAKTLGVIVLDLSNPFWGEVTKGIEAAASEHHYSVLIGASGERR
EKERELLQLFEEHRVEGILVSSVDAGSEAISALVERGTKIVLLDQNGPNSTYSGVAFDHL
RGAHMVATHLVEQGHRSFAFINGPHSVPWCLARSEGFIEGLTEAGLDPAAVLTELTIDTM
TAQDAEPAVEQLLALSARPSAIFCVNDVVALGVLKELTNRGVHVPADLSIVGFDDSSFSS
LLSPALTTVRQLPYELGKRAAEMAITADPSSLPETEMFQPELVRRDSVASLS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaacgacgactcggtccccgaggcgggcgccgttgtcgtccccgacaagagtcac
gtcaccacgcgcgacatcgcggcagcagcgggcgtctcacaggccactgtttcgaacgcc
ctcaaccgtccggacctcgtcgctcctgcaacgttggagcgcatcgaggcggtgatgcgg
aagaccggtttcgtcgtcaactcgttcgcgcgcgggctccgaatgggccgggcgaagacg
ctgggcgtcatcgtcctggacctgtccaacccgttctggggagaggtcaccaagggcatc
gaggcggcggcgagcgagcaccactattccgtcctcatcggagcctcgggcgagcgacgc
gagaaagagcgcgagcttcttcagctcttcgaagagcaccgggtggagggaatcctcgtc
tcgagtgtcgatgccgggtcggaggccatcagcgcgctcgtcgagcgcggcacgaagatc
gtccttctcgaccagaacgggccgaactcgacctactccggtgtcgcgttcgaccacctt
cgcggagcacacatggtcgcgacccacctggtcgagcagggccaccgtagttttgctttc
atcaacggtccgcattccgtgccgtggtgcctcgcgcgctcggagggtttcatcgaaggc
ttgaccgaagcggggctggaccctgccgctgtcctcaccgagctcaccatcgacaccatg
acggcacaggacgccgagccggccgtcgagcagcttctcgcgctctccgcgcggccctcc
gcgatcttctgcgtcaacgacgtcgtagcgctgggtgtcctcaaggagctcaccaaccgg
ggcgtccatgttccggccgacctctcgatcgtcggcttcgacgacagcagcttctcctca
ctgctgtctcccgcgctgaccaccgttcggcaactgccatacgagctgggcaaacgcgcc
gccgagatggccatcacggccgatccatcgagtctccccgagaccgagatgttccagccc
gagctcgtgcgcagggattccgtcgcgtccctctcctag
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