Frondihabitans sucicola: GCM10025867_37710
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Entry
GCM10025867_37710 CDS
T09158
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K16438
5-epimerase [EC:5.1.3.-]
Organism
fsb
Frondihabitans sucicola
Pathway
fsb00523
Polyketide sugar unit biosynthesis
fsb01055
Biosynthesis of vancomycin group antibiotics
fsb01100
Metabolic pathways
fsb01110
Biosynthesis of secondary metabolites
fsb01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GCM10025867_37710 (rfbC)
01055 Biosynthesis of vancomycin group antibiotics
GCM10025867_37710 (rfbC)
09110 Biosynthesis of other secondary metabolites
00404 Staurosporine biosynthesis
GCM10025867_37710 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
MLVIN_C
Motif
Other DBs
NCBI-ProteinID:
BDZ51530
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Position
complement(3505877..3506494)
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AA seq
205 aa
AA seq
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MQIRELTIPGAWEFTPKQHGDDRGVFFEQYRYETLEETVGHPLTLKQTNTSVSVRGVARG
IHYALVPPSQAKYVSAPRGAFIDFVIDIRTGSPTFGQWDSVLIDDVDRRAVYLSEGLGHA
IVALTEGATVNYLVSEVFNPEREKGLSVTDPEIGLVFPSDLGEPLLSPKDVAAPTLAEAA
EQGLLPSYDECLAYYESLRTQRAEV
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgcagattcgcgaattgacgatcccgggggcgtgggagttcacgccgaagcagcacggc
gacgacagaggtgtcttcttcgagcagtaccgctacgagaccctcgaagagacggtcggc
caccctctcacgctcaagcagacgaacacgtcggtgtcggtgcgcggtgtcgcgcggggc
atccactacgcgctcgtcccgccgagccaggccaagtacgtctccgctccccgaggagcc
ttcatcgacttcgtgatcgacatccgcaccggctcgcccaccttcggccaatgggacagc
gtcctgatcgacgacgtggaccgccgggcggtctacctgtcggaggggctcggccacgcg
atcgtcgccctgaccgagggcgccacggtcaactacctcgtctccgaggtgttcaacccg
gagcgcgagaaggggctcagcgtcaccgaccccgagatcggcctggtcttcccgtccgac
ctcggagagccgctcctctcgccgaaagacgtcgccgccccgaccctggccgaggctgcg
gagcagggcctgctgccctcctacgacgagtgcctcgcctactacgaatcgctgcgcacg
cagcgggcggaggtctag
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