Frondihabitans sucicola: GCM10025867_39160
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Entry
GCM10025867_39160 CDS
T09158
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
fsb
Frondihabitans sucicola
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsb03400
]
GCM10025867_39160
DNA repair and recombination proteins [BR:
fsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
GCM10025867_39160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
Zot
FtsK_SpoIIIE
AAA
ResIII
TrwB_AAD_bind
AAA_10
AAA_16
AAA_6
CbiA
T2SSE
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BDZ51675
LinkDB
All DBs
Position
complement(3656287..3658251)
Genome browser
AA seq
654 aa
AA seq
DB search
MSDAVDKARADAEAAVAAAKKAQEDAEAALAHAQQLAAEAAVAAEAAAEQASAAAADEPT
APAAPPAPAASSARAATDGPLGVDDVAAIRAGYAFSGAALEMGGLVNGEALADVPVRIPL
AMLNRHGLVAGATGTGKTKTLQVLAEQLSAAGVPVFAADVKGDLSGIATPGEPNDKLLER
TRGIGQDWSPQAAPTEYFALGGKGTGIPVRATVSGFGPLLLSKVLGLNDTQESSLGLVFH
YAEKAGLPLLDLSDLRSVLTYLISDGGKGELTDLGGLSSQTVGVILRELITFADQGADEF
FGEPEIDTAEFLRTAPDGRGIVSLLELPGVATQPALFSTFLMWMLADLYNDLPEVGDLDK
PKLVFFFDEAHLLFRDASKDFLASITQTVRLIRSKGVGIVFVTQTPKDVPSEVLAQLGSR
VQHQLRAFTPDDAKALKATVSTYPSSGYDLGQVLQSLATGEAIVTVMNEKGAPSPVAWTR
LRAPRGSMSPTPQPDMDAAVAASPLLARYGTAIDRESAREILTAKLEGAAAVEREKADAK
ARDDAAALAEKEAAAKQKAAAALEKAARTADAQAAKERAKIQAEYEKQQREFERAEKAQR
AAAARAKPRTTARSGSRASGASGSMIEDILGSKSSQKIVADVAKGIFGTLLRRR
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcagtcgacaaagccagggccgatgccgaagcggcggtcgccgccgcgaag
aaggcgcaggaagacgcagaagcagctctggcacacgcccagcaactggctgcagaggca
gccgttgccgccgaagccgcggccgagcaggcgagcgccgccgctgccgacgagccgacg
gctccagccgccccaccggctccagccgcctcgtcggcgcgcgccgcgacggacggaccg
ctcggagtcgacgacgtcgctgccattcgcgccggctacgcgttctcgggtgctgctctc
gagatgggcgggctcgtgaacggagaagccctcgccgacgttccggtgcggattccgctg
gcgatgctcaaccgccacggcctggtcgcgggcgccaccggaaccggcaagacgaagacg
ctccaggtgctcgcggagcagctgtcggcggccggggtcccggtgttcgcggccgacgtc
aaaggcgacctgtcaggcatcgcgacgcccggagagccgaacgacaagctgctcgagcgc
acccgaggcatcggccaggactggtcgccgcaggccgctccgacggagtacttcgctctc
ggcggcaagggcaccggtattcccgtgcgggccaccgtgtcggggttcggtccactcctg
ctcagcaaagtgctcggcctgaacgacacgcaggagtcgagcctcggtctcgtcttccac
tacgccgagaaggccgggcttccgctgctcgacctcagcgatctccgcagcgttctgacg
tacctcatcagcgatggcggaaagggcgagctcaccgacctgggcgggctcagctcgcag
acggtgggagtgatcctgcgcgagctgatcaccttcgccgaccagggagccgacgaattc
ttcggggagccggagatcgacacggcggagttcttacggaccgccccggacgggcgcggc
atcgtcagcctgctcgagctgcccggggtcgcgacgcagcccgcgctcttctcgaccttc
ctgatgtggatgctcgccgacctgtacaacgacctgcccgaggtcggcgacctcgacaag
cccaagctggtgttcttcttcgacgaggcccacctgctcttccgcgacgcttcgaaagac
ttcctggcgtcgatcacgcagacggtccggctgatccggtcgaaaggcgtcggcatcgtc
ttcgtcacgcagacgccgaaggacgtcccgagcgaggtgctcgcgcagctcggctcgcgc
gtgcagcaccagctgcgcgcgttcacgcccgacgacgccaaggcgctgaaggcgaccgtg
tcgacgtacccgtcgagcggttacgacctcggtcaggtgctgcagtcgctggccaccggt
gaggcgatcgtcaccgtcatgaacgagaagggtgcgccgagccccgtcgcgtggacgcgt
ctgcgggctccgcgcgggtcgatgtcgcccactccgcagccggacatggatgccgccgtg
gcagccagcccgctgctggccaggtacggcacggcgatcgatcgggagtcggctcgcgag
atcctgacggccaagctggagggtgcggcggcggtcgaacgagagaaggccgacgccaag
gcacgcgacgacgctgcggcgctcgccgagaaggaagctgcggccaagcagaaggcggcc
gcggccctcgagaaggccgctcggacagccgacgcgcaagcagccaaggagcgcgccaag
atccaggccgagtacgagaagcagcagcgcgaattcgaacgggccgagaaggcgcagcgc
gctgccgccgcgcgcgccaagccgcgcacgacggcgcgctctggctcgagggcgtccggc
gcgagcgggtcgatgatcgaggacatcctgggatcgaagtcgagccagaagatcgtcgcg
gacgtcgcgaaggggatcttcggaacgcttttgcgccggcgctga
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