Frondihabitans sucicola: GCM10025867_40420
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Entry
GCM10025867_40420 CDS
T09158
Name
(GenBank) hypothetical protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fsb
Frondihabitans sucicola
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsb03400
]
GCM10025867_40420
Enzymes [BR:
fsb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GCM10025867_40420
DNA repair and recombination proteins [BR:
fsb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GCM10025867_40420
Prokaryotic type
GCM10025867_40420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
BDZ51801
UniProt:
A0ABN6Y3Z0
LinkDB
All DBs
Position
3762467..3763297
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AA seq
276 aa
AA seq
DB search
MVSRTLVWLRDDLRVADNPALHHAIQRGGEVVVAYVLDDETTAIRPLGGASRWWLHQSLA
ALSAELERRGARLTLRRGAAADVIPSLVDESGADAVFWNRRYGKAARDADAALKSSLRDR
ELDVSSFQGSLLFEPWTVQTGQGTPFKVFTPFYRACLEQPEPRHPFPAPSDIPSPATALP
SDDLDSWALEPSRPDWAGGLRDRWEPGEKGRTAPSRRSSATISPTTPTATSRPTTRRATS
PRSSASARSAPSRSGTACAATSRRTRRGRWGLSSAR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtggtctcccgaaccctggtctggctgcgcgacgaccttcgcgtggccgacaatccagca
ctgcaccacgcgatccagcgcgggggcgaggtcgtcgtggcctatgtcctcgacgacgag
accaccgcaatccgcccgctcgggggcgcctcccgctggtggttgcatcagagcctcgcc
gctctgtccgccgaactcgagcgacgcggcgcacgtctgaccctccgtcgcggcgcggcg
gccgatgtcattccctccctcgtcgacgagtcgggcgccgacgccgtgttctggaaccgc
cggtacggcaaggcggcgcgcgacgccgacgcggctctcaagtcgtcgctccgcgatcgt
gagctcgacgtgagcagcttccagggcagcctgctgttcgagccctggacggttcagacc
ggccagggcaccccgttcaaggtcttcacgccgttctatcgcgcctgtctcgagcagccc
gagcctcgacaccccttcccagcgccgagcgacatcccctcccccgcgacggccctcccg
agcgacgacctcgactcctgggctctcgagccctctcgccccgactgggcgggcgggctc
cgcgaccggtgggagcccggggagaaggggcgcaccgcaccctcgaggcgttcatccgcg
acgatctcgccgactacgccgaccgcgacttcccggccgacgacacgacgagccacctct
ccccgttcctccgcttcggcgagatcagccccttccaggtctggcaccgcctgcgcggca
acgtcccgcagaacgcgaaggggcaggtgggggctttcctccgccaggtga
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