Frondihabitans sucicola: GCM10025867_43790
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Entry
GCM10025867_43790 CDS
T09158
Symbol
gabT
Name
(GenBank) aspartate aminotransferase family protein
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
fsb
Frondihabitans sucicola
Pathway
fsb00250
Alanine, aspartate and glutamate metabolism
fsb00280
Valine, leucine and isoleucine degradation
fsb00310
Lysine degradation
fsb00410
beta-Alanine metabolism
fsb00640
Propanoate metabolism
fsb00650
Butanoate metabolism
fsb01100
Metabolic pathways
fsb01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
GCM10025867_43790 (gabT)
00650 Butanoate metabolism
GCM10025867_43790 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
GCM10025867_43790 (gabT)
00280 Valine, leucine and isoleucine degradation
GCM10025867_43790 (gabT)
00310 Lysine degradation
GCM10025867_43790 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
GCM10025867_43790 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fsb01007
]
GCM10025867_43790 (gabT)
Enzymes [BR:
fsb01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
GCM10025867_43790 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
GCM10025867_43790 (gabT)
2.6.1.48 5-aminovalerate transaminase
GCM10025867_43790 (gabT)
Amino acid related enzymes [BR:
fsb01007
]
Aminotransferase (transaminase)
Class III
GCM10025867_43790 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Motif
Other DBs
NCBI-ProteinID:
BDZ52138
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All DBs
Position
4084265..4085713
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AA seq
482 aa
AA seq
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MSCTPYIGVYPFCTTLISTPEEATVTIVDSSDAGPYVPGQTTGGPGLPQRRRLVTEIPGP
RSRELLARKSSAVARGVGISLPVFTDAAGGGVLVDVDGNSFIDFGTGIAVTGVGNAAPGV
VTAVQQQVERYTHTCFMITGYDSYVDVAEALNRLTPGDHDKRTALFNTGAEAVENAVKIA
RSYTGRPAVIAFDHAYHGRTNLTMALTAKAMPYKSGFGPFAPEIYRAPLSYPYRDGLSGD
EAAREAIAMIEKQVGAASVAAVIIEPIQGEGGFIVPAPGFLSALSAWATENGVVFIADEV
QTGFARTGAMFASEHEGIVPDLIATAKGIAGGLPLSAVTGRAEIMDAPHVGGLGGTYGGN
PVACAAALAAIEAYEHDGLIERAGEIETLMKARLTDLQSRDPRIGDVRGRGAMIAIELVD
PLTGEPDAALTAAVAKHSHDNGVVLLTCGTFGNVIRFLPPLSINDALLHDGLDVVAHALE
AA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtgcactccctacattggcgtctatccgttctgcaccaccctgatcagcacccct
gaggaggccaccgtgacgatcgtcgattccagcgacgcagggccctacgttcccggccag
acgacgggcgggcccggcctgccccagcgccgacgcctcgtcaccgagatccccggcccc
cgttcccgggagctcctcgcgcgcaagtcgagtgccgtcgcccgcggtgtcggaatcagc
ctgccggtcttcaccgacgcggccggcggcggcgtcctcgtcgacgtcgacggcaacagc
ttcatcgacttcggcaccggcatcgcggtcaccggtgtcggcaacgccgctcccggcgtc
gtcacggcggtgcagcagcaggtcgagcggtacacccacacgtgcttcatgatcacgggc
tacgactcctacgtcgacgtcgccgaagccctgaatcgtctcacgcccggcgaccacgac
aagcgcacggctctgttcaacacgggtgcggaggccgtcgagaacgccgtcaagatcgcc
cgctcctacaccgggcggcccgccgtgatcgcgttcgaccacgcatatcacggccgaacc
aacctcacgatggcgctcacggccaaggcgatgccctacaagtcgggtttcggtccgttc
gcgcccgagatctaccgagcaccgctctcctacccgtaccgcgacggcctgagcggcgac
gaggccgcccgcgaggccatcgcgatgatcgagaagcaggtcggtgccgcttccgtggcc
gccgtcatcatcgagccgatccagggcgagggcggcttcatcgtgcccgcacccgggttc
ctcagcgcgctctccgcgtgggcgaccgagaacggggtcgtcttcatcgccgacgaggtc
cagaccggcttcgcccggacgggcgcgatgttcgccagcgagcacgagggcatcgtcccc
gacctcatcgcgacggccaaaggcatcgccggcggccttcccctgtcggcggtcacaggg
cgggcagagatcatggacgccccgcacgtgggcggcctcggcggcacctacggcggaaac
ccggtcgcctgcgctgccgcgctggcggcgatcgaggcctacgagcacgacggtctcatc
gagcgcgccggcgagatcgagacactcatgaaggcgcggctcaccgacctccagtcgcgc
gaccctcgcatcggtgatgtccgcggtcgcggcgccatgatcgccatcgagctcgtcgat
ccgctcaccggcgagcccgacgcagccctcacggcggcggtcgccaagcacagtcacgat
aacggcgtggtgctgctgacctgcggtacgttcggcaacgtcatccgattccttccgccc
ctgtccatcaacgacgccttactccacgacggcctcgacgtcgtggcgcacgccctggag
gcagcatga
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