Frondihabitans sucicola: GCM10025867_47290
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Entry
GCM10025867_47290 CDS
T09158
Symbol
pilC
Name
(GenBank) type II secretion system protein F
KO
K02653
type IV pilus assembly protein PilC
Organism
fsb
Frondihabitans sucicola
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fsb02044
]
GCM10025867_47290 (pilC)
02035 Bacterial motility proteins [BR:
fsb02035
]
GCM10025867_47290 (pilC)
Secretion system [BR:
fsb02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
GCM10025867_47290 (pilC)
Bacterial motility proteins [BR:
fsb02035
]
Pilus system
Pilus assembly proteins
GCM10025867_47290 (pilC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF2207_C
Motif
Other DBs
NCBI-ProteinID:
BDZ52488
UniProt:
A0ABN6Y912
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All DBs
Position
pNBRC108728a:complement(142388..143632)
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AA seq
414 aa
AA seq
DB search
MSIVTAEKKFNYKARDNDGIIRHGTGQASSRRHIVSELTKRGWTPLDVREGGASLFTNFE
ITLRKRSKATSLVVGIRQLAACLEAGLPLPRALEIMGESEDQIFADGVRAVARDVEAGNP
LSVAMRRQPNAFPSMIPDMLAAGEAGGYLAKSAGQVADSIEADDNLRKKVKKALSYPTIV
MSVSALIFIFMMVYIVPTFANLYESMSDGKVQLPALTRAVVAVSDSMIWLLPTIGILGVA
FFFWYRKYGRTEKVREVWDPMKLKIPVFGKLFHLISLSRFTRNFGALLSSGVPIQESLRM
TAEIVNNIRMERAILAARDEVLKGKSLVEPLKDEPDLFPNMAIQFIYAGQESGETPQMLQ
KASAIYDRDVNTITDNLTALIEPLFIVVLAFMVGTLAIAIYLPYLNIGNLMDAS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgttaccgcagagaagaagttcaactacaaggcccgtgacaacgacgggatc
atccgccacggcacaggtcaggcgtcgagccgccgccacatcgtcagtgagctgaccaag
cgcggctggacgcccctcgacgtccgcgaaggcggtgcgagcctcttcaccaacttcgag
atcacgctgcgcaagcgctccaaggcaacctcgctcgtcgttggcatccgccagctcgca
gcgtgcctcgaagcgggtcttccgcttccgcgggccctggagatcatgggcgagagcgag
gaccaaatcttcgccgacggcgtccgcgccgtggcgcgcgacgtggaggcgggcaacccg
ctcagtgtggccatgcgtcgccagcccaacgcgttcccctcgatgatccctgacatgctc
gctgctggtgaggctggcggatatctcgcgaagtcggcgggccaggtcgcggacagcatc
gaagcggacgacaacctccgcaagaaggtcaagaaggccctcagctacccgacgatcgtc
atgagcgtctcggctctcatcttcatcttcatgatggtctacatcgtgccgacgttcgcc
aacctctacgagagcatgtccgacggcaaggtccagctccccgcgctcacccgtgccgtg
gtcgccgtgtctgactcgatgatctggctgctcccgaccatcggcatcctcggtgtcgcg
ttcttcttctggtaccgcaagtacgggaggaccgagaaggtgcgcgaggtctgggacccc
atgaagctcaagattcccgtcttcggcaagctgttccacctcatctcgctttctcgcttc
acccgcaacttcggcgcactcctcagttccggggtccccatccaggagagcctgcgcatg
acggcggagatcgtcaacaacatccgcatggagcgcgccatcctcgcggcccgcgacgag
gtgctgaagggcaagtcgctcgttgagcccctgaaggacgagccggacctgttccccaat
atggccatccagttcatctacgcgggccaggagtcgggcgagacccctcagatgctccag
aaggcctcggcgatctacgaccgcgacgtcaacaccatcacggacaacctcaccgccctc
atcgagccgctgttcatcgtcgtcctggcgttcatggtcgggacgctcgcgatcgccatc
tacctgccgtacctcaacatcggcaacctgatggacgcgagctga
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