Fibrobacter succinogenes: FSU_0253
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Entry
FSU_0253 CDS
T02105
Name
(GenBank) putative membrane-bound lytic murein transglycosylase D
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
fsc
Fibrobacter succinogenes
Brite
KEGG Orthology (KO) [BR:
fsc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fsc01011
]
FSU_0253
Enzymes [BR:
fsc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FSU_0253
Peptidoglycan biosynthesis and degradation proteins [BR:
fsc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FSU_0253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM3_NFP
LysM2_CERK1_LYK3_4_5
NMB0315_dom_I
LysM2_NFP
Motif
Other DBs
NCBI-ProteinID:
ADL26972
UniProt:
C9RPN6
LinkDB
All DBs
Position
complement(286657..289035)
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AA seq
792 aa
AA seq
DB search
MIWSNKFVRLGLALAFLILTACAPKQAKLAASSQGKPIQLEKVSIDVPGPNPGKEVVGDS
TRPSWVYYQYGLQAIDNNQWAVSKHYLEESLRLLVTEKYDSTKSKLTRSEDSIYKMQMPV
RIVQALEDVYPNLAEQEGSDSTSTDSLSIDGVDAYDENAADSASMRVIENFLDTVDAGRF
SLPIRFNERVMQEIYYMTTSARGFITRSLSRKTAYDSLIYSKLAQKRMPRDLIYLALVES
GFNVKAYSRAKAAGMWQFIPETGIRYGLEVDFWVDMRRNPEMATEAALSYLSTLYAEFGD
WLLSMAAYNCGEGRIRRLIREKKADSTWGNRPVTYWDLQLPQETMHYVPRILAAMVIGHY
PEHYDVSVTKHQLAPYDTVTVYDSFSMDEISKFLKVPEDTLRTLNMELTMWCTPPNRDAY
LLRLPYGTRAAFVQNYDRMEKNGFSSWKQHKVRKGESLGAIAQQYGVRVAEIQRANDLKK
TKLKPGRTLLIPIKVAPRRSTGKKPTKVRTYVVQLGDNLGSISRRFGVSQESLRVWNNIE
TGYNVKKGDTIYVSKPDLKPTSFIQQRVALKKGEKYVVKAGDTYAQIAKKYKVPVFLLLQ
ANQGFTKRLTIGDSLVIPAYVRPLRRMSGAVDDGVPEVEPSKSNEPVTDSKKSSKTAKKT
AEKTPEPATKTSKKAPVNTTIIYTVEPGDNLFAISKKFSTTVAAIRDMNEMGNSSNIKVG
QKLKIPGSAAPAPSAPKVEEITHVVKKGEGLWDISRQYGVTIEDIVKWNGLKDTKIKINE
KLKIKTTKKIKK
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
gtgatatggtcgaataaatttgtaagactcggccttgcacttgcttttttgatcctgacc
gcctgcgcacctaagcaggcgaagcttgccgcgtcatcgcaggggaaacctatccagctg
gagaaggtgtctattgatgtacctggaccaaatccgggtaaggaagtcgtaggggattcc
acgaggccatcctgggtctattatcagtatggcttacaggcgatagacaacaaccagtgg
gctgtttctaaacactatcttgaagaatctttgcgtctcttggtaacggaaaagtacgat
tcaacaaagagcaagctgacccgttccgaagattccatttacaagatgcagatgcctgtg
cgcattgttcaggctcttgaagatgtatacccgaatctagccgagcaggaggggagtgat
tccacttcgacggatagcctttccatagatggcgtggatgcttatgatgaaaatgcggcg
gatagcgcatcgatgcgagtcatcgaaaatttcctcgacaccgttgatgccgggcgtttt
tcgcttccgattcgctttaacgaacgtgtcatgcaagaaatttactacatgacgacgtct
gcacgtggttttatcacgcgttcgctttctcgcaagacggcctatgattccttgatttac
tccaagcttgcccaaaagcgcatgccgcgagacctcatttatttggcgttggtggaatct
ggttttaatgtgaaggcatatagccgagctaaggccgcgggtatgtggcaattcattccg
gaaacgggtatccgctatggcctggaagttgatttttgggtcgatatgcgtcgcaatcct
gaaatggcgaccgaagccgctttgagctatctttcaaccttgtatgctgaatttggcgac
tggcttttgtcaatggccgcttacaactgcggtgaaggccgaattcgtcgattgatccga
gaaaagaaggctgattctacatggggcaatcgccctgtaacgtattgggacttgcagctc
ccgcaagagaccatgcattatgtgccgcgaatccttgcggcgatggtcattggccattat
ccagagcattacgacgtgtctgttaccaagcatcagctggctccttacgatacggtaacc
gtttacgattccttctcgatggacgaaatctctaagttcctgaaggtccccgaagatacg
ctccgtactttgaacatggaactcaccatgtggtgtacgccacccaatcgcgatgcctat
ttgctccgtttgccttacgggacgcgtgctgcgtttgtgcaaaattacgaccgcatggaa
aagaacggcttttcgagctggaaacagcacaaagtccgcaagggcgaatcccttggcgcg
attgctcagcagtatggcgttcgcgtggccgaaattcagcgagcgaatgacttgaagaag
accaagctcaagcccggccgtacgctccttattccgatcaaggttgctccgcgcaggtct
actggcaaaaagccgactaaggttcgcacatacgtggttcagttgggcgacaatcttggc
tcgatttctcgccgctttggagtttctcaggaatcgcttcgcgtttggaataatattgaa
actggttataacgtcaagaaaggcgatactatttacgtctctaagccggatttaaagcca
acgagctttatccaacagcgtgtggcgcttaaaaagggcgaaaagtatgtggtcaaggcg
ggggatacctacgctcagattgctaagaagtacaaggttcctgtattcttgctgttgcag
gcaaatcagggttttacaaagcgcttgacgattggtgattctcttgtgattcctgcttat
gtccgcccactccgccggatgtctggcgctgttgatgatggtgttcctgaagtggaacct
tccaagtctaacgaacccgttacggattctaaaaagtctagcaagaccgctaaaaagacg
gctgagaagactccagaacctgcaacaaagacttcaaagaaggccccggtcaatacgact
attatttataccgttgagcctggggacaatctctttgccatttccaagaagttttccacg
acggttgccgctatccgcgacatgaacgaaatgggcaattcttcaaatatcaaggtcggt
caaaagctcaagattccgggctctgctgctccggcaccgagcgctccgaaggtggaagag
attactcatgtggtcaaaaagggtgagggcctttgggatatttcgcgccagtacggcgtg
acaattgaagatattgtgaagtggaatggcctgaaagacacgaaaatcaagatcaatgag
aagctaaaaatcaagacaaccaagaaaatcaagaaataa
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