Fibrobacter succinogenes: FSU_0598
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Entry
FSU_0598 CDS
T02105
Symbol
hepA
Name
(GenBank) RNA polymerase-associated protein HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
fsc
Fibrobacter succinogenes
Brite
KEGG Orthology (KO) [BR:
fsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fsc03021
]
FSU_0598 (hepA)
Transcription machinery [BR:
fsc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
FSU_0598 (hepA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
Tudor_RapA
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ADL27093
UniProt:
D9S772
LinkDB
All DBs
Position
complement(670091..673081)
Genome browser
AA seq
996 aa
AA seq
DB search
MMMFKIGQRYVSQAEPTLGLGIVSEVQGRTVKILFPSIGQARIYRTDEAPIERFVLQVGE
TVKSEKGVSFVVDSVREDAGIMVYVGRNGKEMKESELSAKISTARPAVLFKALADDEVCS
SRDFLRHEDAMEMYYKWISSPVRGMIGPRVNMIPHQYYLCYRACSSSTLPRLMLSDEVGL
GKTIEAGMIWHALKSRGRIQRTLVIVPETLKHQWMIEMKRRFNQLFTLVDEGYIRGLFVG
VAKDETKPNPFMQSNDIIVSIDFLMAQPALIEDLLKTNWDMTIIDEAHHLVCEDGFTSHE
YMLANRVIGRSKGVLLLTGTPLQLHPESQFNRLKMLDPVRFADYNDFIKDQEAYLKLVRD
LNKLPTDPNHHMSWDDLYECVPKNSQIRPWLEQENSKSMTAGEWMRCIVDGMGTGSVVFR
NTRKGVGGFPKRVLDEIPLEPNPAYREMVDVAADRDLEASTDIQENGLLCTRFSDAWAMD
ERFVWLKGFLKEYKNEKVLLICESIQVVQALETLLLEFLGEGAFVMFHEDMSIMARDKAA
ANFSKPDGANLLIASEIGSEGRNFQFSHHLVLFDLPLDAALVEQRIGRLDRIGQDKDIII
HVPYVKGSGQEVMFRWYNEGLNSFGAPLMSGGELFLKYTESLIEALATPRASLENFVENV
IPQVKKDCEQMRKHIENGRDRLLEFNSRNPEKAKEITDEIRELDAEPELKNLVFDSLMNR
GLDVEKSSVQDCFLITMGPQVEAGSVPGMPDLAMAAATAGGGRVNSQTDLCGEGGGDGDG
DGRVSGGTCMTVTFDRDVAMTHDDIEFISLDHPLAQGVFDYETSFGRGTVSCAIWPNSGL
RGLMMQYNFAVELPVSEEWGCADIAGPKYFKVLVNAKGENMSEHFEDLSDAALKDVGVPQ
GNAAVDMTLRYFAKDGLAKARLIVSEQAKKYAEEAANAVEARSEQEYQRMNHLLSMRGKA
GTSEALKQLRKNVQERKKIVANPQLRLDAIRLVVCK
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtttaaaattggtcagcgctacgtgagccaagccgaacctaccctggggctt
ggtattgtatctgaagttcagggccgtactgttaaaattttgttcccgtctatcggtcaa
gctcgtatttacaggaccgatgaagctccgattgaacgttttgttttgcaagtaggtgaa
accgtcaagagtgaaaaaggtgtctccttcgtggtggactccgttcgcgaagatgcgggt
atcatggtttatgtcgggcgtaatggcaaagagatgaaggaatctgagctgagcgcgaag
atttcgaccgctcgaccggcagtgctgtttaaggccttggctgatgacgaagtttgctcg
tcacgtgattttttgcgtcatgaagatgcgatggaaatgtattacaagtggatttcttcg
ccggttcgtggcatgattggcccgcgtgtgaacatgatcccgcaccagtattacctttgc
taccgtgcctgctctagctcgacgctcccgaggcttatgctttcggacgaagtgggcttg
ggtaagacgattgaagcgggcatgatttggcatgcgctcaagtcgagaggccgcatccag
cgtacgctcgtgattgtcccggaaacgctgaagcaccagtggatgattgaaatgaagcgc
cgtttcaaccagctctttacgctggtggacgaaggctacatccgtggcttgtttgtgggt
gtcgcaaaagacgagacgaagcccaatccgttcatgcagagtaacgacatcatcgtgtcc
attgactttttgatggctcagcctgcattgatcgaagaccttttgaagacgaactgggat
atgaccatcatcgatgaagcccaccatctggtgtgcgaggatggtttcacgagccacgag
tatatgcttgcgaacagggtgattggacgctcgaagggcgtgttgcttttgaccggtacg
cccttgcagctccatccggaatcgcagttcaatcgtctcaagatgctcgacccagtgcgc
tttgcagactataacgattttatcaaggaccaggaagcttacctcaagcttgtgcgagat
ttaaataagcttccgaccgacccgaaccaccacatgagctgggacgacttgtacgaatgc
gtcccgaagaactcgcaaattcgcccatggctggaacaggaaaattcaaagtcgatgacc
gcaggcgaatggatgcgctgcattgtcgatggcatgggcacgggttctgtggtgttccgc
aatacgcgtaagggcgtaggcggattcccgaagcgtgtgctcgacgaaattccgctggaa
ccgaatccggcttatcgtgaaatggtggatgtcgctgccgaccgcgacctcgaagcatcc
accgacatccaggaaaatggcctcctctgcacgaggttctccgatgcatgggcgatggac
gaacgctttgtgtggctcaaggggttcctcaaggaatacaagaacgaaaaggttttgctg
atttgcgaatccatccaggtggtgcaggcacttgaaactttgctccttgaattcttgggc
gaaggtgcgtttgtgatgttccacgaagatatgagcatcatggcgcgcgacaaggctgcg
gcaaacttcagcaagcctgatggtgctaacttgctcatcgcttctgaaattggttctgaa
ggccgtaacttccagttctctcatcacttggtcttgttcgacttgcctcttgatgcagct
ctcgtggaacagcgtattggccgcttggaccgcattggtcaggacaaggacatcatcatc
cacgtgccgtacgtgaagggctctggccaggaagtgatgttccgctggtacaacgaaggt
ttgaattcgtttggcgctccgctcatgagcggtggagaactcttcctcaagtacacggaa
tctttgattgaagctttggcaacgccgcgcgctagccttgaaaattttgtggagaacgtc
atcccgcaggtcaagaaagactgcgagcagatgcgtaagcatatcgaaaacggccgtgac
cgcttgctcgaattcaactcccgtaatccagaaaaggcaaaggaaatcacggatgaaatt
cgtgaacttgatgcggaaccggaactcaagaatctcgtgtttgattccttgatgaatcgc
ggactcgatgtcgaaaagagctctgtgcaggattgcttcctcatcacgatgggaccgcag
gttgaagcgggctctgtgccgggcatgcctgatttggcaatggctgcggctactgcaggt
ggtggccgcgtgaatagccaaacggatttgtgtggcgaaggtggtggagatggcgacggc
gatggccgtgtgagtggtggcacttgtatgacggtcacgttcgatcgtgatgtcgctatg
acgcacgacgatattgaatttatcagcttggaccatccgctggctcagggcgtgttcgat
tacgaaacgagctttggccgtggaacggtgtcttgtgccatttggccgaactccggtttg
cgtgggctcatgatgcagtacaactttgctgtggaactgcctgtgtccgaagaatggggc
tgtgccgatattgcagggccgaagtatttcaaggtgctggtgaatgcgaagggcgaaaac
atgtccgagcatttcgaagatctttcggatgcggcgctcaaggatgtgggggtcccgcag
ggcaatgcggctgtcgatatgacgcttcgttactttgctaaggatggccttgcgaaggct
cgcttgattgtttctgaacaggctaagaagtatgccgaagaagcagcaaatgccgtggaa
gcccgttcggaacaggaataccagcgcatgaaccatttgctttcgatgcgtggcaaggcg
gggacgagcgaagctttgaagcagctccgcaagaacgtgcaggaacgcaagaagattgtg
gctaacccgcaactccgcctcgatgcaatccgcctggtggtgtgcaagtaa
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