Fibrobacter succinogenes: FSU_0762
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Entry
FSU_0762 CDS
T02105
Symbol
hup_1
Name
(GenBank) DNA-binding protein HU
KO
K05788
integration host factor subunit beta
Organism
fsc
Fibrobacter succinogenes
Brite
KEGG Orthology (KO) [BR:
fsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsc03032
]
FSU_0762 (hup_1)
03036 Chromosome and associated proteins [BR:
fsc03036
]
FSU_0762 (hup_1)
03400 DNA repair and recombination proteins [BR:
fsc03400
]
FSU_0762 (hup_1)
DNA replication proteins [BR:
fsc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FSU_0762 (hup_1)
Chromosome and associated proteins [BR:
fsc03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
FSU_0762 (hup_1)
DNA repair and recombination proteins [BR:
fsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FSU_0762 (hup_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ADL26472
UniProt:
C9RKN2
LinkDB
All DBs
Position
837973..838323
Genome browser
AA seq
116 aa
AA seq
DB search
MKATQSNITKKEIVDEIASQTGFTQVKTKVIVEELIDAISNCVIEGNNIELRGFGRFKNK
QRKERRTRNPKTGELVNIPAKVRPVFEPSKDLIEKINNVPFDLEEAFVPKDDQERI
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgactcagtccaacataactaagaaggaaatcgttgatgaaatcgcttcccag
actggatttacgcaagtaaaaaccaaagtcatcgtggaagaactcatcgacgctatttcc
aattgcgttatcgagggcaacaatatcgagttgcgtggattcggtcgcttcaagaataaa
cagcgcaaggaacgccgcacccggaaccccaagactggcgagctggtcaatatccccgcc
aaggtgcgcccggtgtttgagcccagcaaggacttgattgaaaaaatcaacaacgttcct
ttcgacttagaagaggcttttgtccctaaagatgatcaagaaagaatctag
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