Fibrobacter succinogenes: FSU_0827
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Entry
FSU_0827 CDS
T02105
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fsc
Fibrobacter succinogenes
Pathway
fsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FSU_0827 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsc03400
]
FSU_0827 (priA)
Enzymes [BR:
fsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FSU_0827 (priA)
DNA repair and recombination proteins [BR:
fsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FSU_0827 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
PriA_3primeBD
PriA_C
Zn_ribbon_PriA
AAA_16
TrwB_AAD_bind
AAA_19
Viral_helicase1
AAA_30
AAA_22
Flavi_DEAD
AAA_33
DUF87
nSTAND_NTPase5
Zn_ribbon_6
Trm112p
nSTAND6
Motif
Other DBs
NCBI-ProteinID:
ADL26951
UniProt:
D9S857
LinkDB
All DBs
Position
complement(921948..924002)
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AA seq
684 aa
AA seq
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MAKRIPKTSAPEMVKERCNSALLSRFCEVYIPLSPSVFTYGVPEGADIQRGSVVWVQLAR
RKPTLALVSRVHSEKPSFDVRYACPHESGYVFSERYMESLEWVSKYYISSPMRTLNVFWP
ADFDKFLDALLAEKSEPRGEAPSNGPEMEVCSDLPPLTGEQETALASLVEDLDKDGFRGT
LLHGVTGSGKTRVYQELVREALKRNKRVLILVPEIGLTPQTASRFEDYLKVPVVVLHSAL
SAPQKRAGYLAVLDGSAKVVLGTRSAILSPFDFDVVILDEEHDSSFKQQDPAPRYHTRDL
AFHLAQKYGALVVLGSATPCLETFRNAKAGNLKLLTLKNRATAAPLPEVKVIDMGKVRQQ
KGVLMSPALREALSDCIAGGDQAIILMNRRGYSKIRVCTKCGETLYCKHCHIPLVYHKQY
NALMCHYCAALYPVDTPCPTCGAETYEFVGGAIEKLEEEIHEWVADAKVIRMDRDTTQNV
GAVEKILTSFRNREYNILLGTQMVAKGHDFPGVKLVGIVGADSGLGIPDFRSTERLYQLL
SQTAGRAGRAGSGGRVFIQTLNPTEPVMQYAIRHDFDGFAETESSNRQMAFYPPFCKLVE
ISCGSRDENLLRDTVNRLESILRKESSMTVLGPVDAFVPKVQNVFWVKLYIKTQNLAAVR
KVLAPILNAPKAWVAGVEIKVELE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaagaattcccaaaacgtctgctccggaaatggtcaaggaacgctgtaattcg
gcgcttctgtcgcgtttttgcgaggtttacatcccgttgtccccatcggtttttacttac
ggggtgccggaaggagcggatattcagcggggaagtgttgtctgggttcaacttgcccgc
cgtaagcctacgcttgccttggtgagccgtgtccatagcgagaaaccgtcgttcgatgtc
cggtatgcgtgcccgcatgagtcagggtatgtattctctgaacgttatatggaatcgcta
gagtgggtgtctaagtattatataagctcgcccatgcgcactctgaacgtgttttggccc
gctgattttgacaagttcctcgatgccttgctggctgaaaaatctgaacctcggggcgag
gctccctcgaatggacccgaaatggaggtttgttcggacctgccccccttgacaggcgaa
caagagactgcacttgccagtcttgttgaagatttggataaggatggttttcgtggaacg
ctcctgcatggtgtgaccggcagtggcaaaacgagagtttatcaggaattggtgcgcgaa
gcgcttaagcgcaataagcgtgtgctcattctcgtgccagaaattgggcttactccgcag
acggcatcgcgttttgaagattatttaaaagtacctgttgtagtattgcattcggcactt
tcggctccgcaaaagcgtgcaggctatttggctgtgctcgatggttctgcgaaagtggtg
cttgggacgcgcagtgccattctttcgccgtttgattttgatgttgttattttggacgaa
gagcatgattcttcgtttaagcagcaggacccggctccgcgttaccatacgcgtgacttg
gctttccacttggcgcaaaagtacggagctcttgtggtgcttggttctgcaacgccttgt
cttgaaacgttccgcaatgcaaaggcggggaacctcaaactgttgacgctcaagaaccgt
gcgaccgcggctccgctccccgaagtgaaagtgattgatatgggcaaggtgcgccagcaa
aaaggcgtgctcatgtctcctgcattgcgcgaagcgctttcggattgcattgcgggtggc
gaccaggcgattatcctcatgaatcgtcgcggttactctaagattagagtttgtactaaa
tgtggtgaaacgctttactgcaaacattgccatatcccgctcgtgtaccataaacagtac
aatgcgttgatgtgccattactgtgctgcgctttatccggtcgatacgccatgcccgaca
tgcggtgctgaaacgtatgaatttgtcggaggcgccattgaaaagctcgaagaagaaatt
catgaatgggtggcggatgcgaaagtaatccgcatggatcgcgatacaacgcagaacgtg
ggcgctgtcgaaaaaatcttgacatcgttcaggaatcgagaatacaatattttgcttgga
acgcagatggtcgcgaaaggccacgatttcccaggcgtgaagcttgtgggaattgtcggt
gctgattcgggacttggcattcctgattttcgttcaacggaacgcttgtatcagctattg
agccaaacggcgggacgtgcggggcgcgcaggtagcggtggccgcgtgtttatccagacg
ctcaacccgacagaacctgtgatgcagtatgccattcgccatgactttgatggctttgcc
gaaactgaatcttcgaatcgtcagatggctttttatccgccgttttgcaagcttgttgaa
atcagttgtggctcgcgcgatgagaacttgcttcgcgacacggtgaaccgccttgaaagt
attttgcgcaaggaatcttcgatgacagtccttggacctgttgatgcgtttgtaccgaaa
gtgcagaacgtgttttgggtaaagctctacattaaaacgcaaaaccttgcggctgtgcgt
aaggtgcttgctccgattctgaatgcgcccaaggcttgggtggcaggcgtggaaattaaa
gtagagctagaataa
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