Fibrobacter succinogenes: FSU_1219
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Entry
FSU_1219 CDS
T02105
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
fsc
Fibrobacter succinogenes
Pathway
fsc00521
Streptomycin biosynthesis
fsc00523
Polyketide sugar unit biosynthesis
fsc00525
Acarbose and validamycin biosynthesis
fsc00541
Biosynthesis of various nucleotide sugars
fsc01100
Metabolic pathways
fsc01110
Biosynthesis of secondary metabolites
fsc01250
Biosynthesis of nucleotide sugars
Module
fsc_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
fsc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FSU_1219 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FSU_1219 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FSU_1219 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FSU_1219 (rfbB)
00525 Acarbose and validamycin biosynthesis
FSU_1219 (rfbB)
Enzymes [BR:
fsc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FSU_1219 (rfbB)
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Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
ADL25259
UniProt:
C9RNE2
LinkDB
All DBs
Position
complement(1391426..1392565)
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AA seq
379 aa
AA seq
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MKRSIVITGGAGFIGSHVVRLFVNKYPEYNIINLDKLTYAGNLANLKDVEGKPNYKFVKM
DICDFDAFYKLMQDEKVDGIIHLAAESHVDRSIKDPFTFARTNVMGTLSLLQAAKLYWES
LPEKYEGKRFYHISTDEVYGALKMNHPEGITPPFTTTASSSEHHLAYGDDFFYETTKYTP
HSPYSASKAGSDHFVRAFHDTYGMPTIVTNCSNNYGPYQFPEKLIPLFINNIRHKKPLPV
YGKGENVRDWLFVEDHARAIDVIFHNGKIAETYNIGGFNEWKNIDIIKVVIKTVDKLLGR
AEGEDLNLITYVTDRLGHDARYAIDSTKLQKELGWEPSLQFEEGIEKTVRWYLDNQEWLD
NITSGDYEKYYEKMYGDRT
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgatccatcgtaattacaggcggggcaggctttatcggaagtcatgtcgttcgt
ctatttgtcaataagtaccccgaatacaatatcatcaacctcgacaagctcacgtatgcg
ggtaacctcgcaaacttgaaggatgtcgaaggcaagccgaactacaagttcgtgaagatg
gacatctgcgactttgatgctttctacaagctcatgcaagacgaaaaagtcgatggaatc
atccatctcgctgcagaaagccatgtggaccgttccatcaaggacccgttcacctttgct
cgcacgaacgtcatgggtactttgagcctcctccaggctgcaaagctttactgggaaagc
ctcccggaaaagtacgaaggcaagcgtttctaccacatttcgactgacgaagtttacggc
gccctcaagatgaaccacccggaaggcatcacgcctccgttcacgactacggcgtccagt
tcggaacaccacttggcctacggtgacgacttcttctacgaaacgacgaagtacactccg
cacagcccgtattccgcttcgaaggctggctccgaccacttcgtgcgcgcgttccacgac
acttacggcatgccgacgattgtcacgaactgctccaacaactatggcccgtaccagttc
cccgaaaagctcatcccgcttttcatcaacaacatccgccataagaaaccgctcccggtt
tatggcaaaggcgaaaacgtccgcgactggctttttgtcgaagaccacgcccgtgcgatt
gacgtgattttccacaacggaaagattgccgaaacctacaacatcggcggcttcaacgaa
tggaagaacatcgacatcatcaaggtcgtcatcaagaccgtcgataagcttctcggccgc
gccgaaggcgaagacctgaacctcatcacttacgtgacggaccgcctgggtcacgacgcc
cgctatgccatcgactccaccaagctccagaaggaactcggctgggaaccgtcgttgcag
ttcgaagaaggcatcgaaaagactgtgcgctggtacttggacaaccaggaatggctggac
aacatcacgagcggcgactacgaaaaatattacgaaaaaatgtacggagatagaacttag
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