Fibrobacter succinogenes: FSU_1221
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Entry
FSU_1221 CDS
T02105
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
Organism
fsc
Fibrobacter succinogenes
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Motif
Pfam:
DUF3516
DEAD
DEXQc_Suv3
ResIII
Helicase_C
SAC9_GBDL_2nd
IstB_IS21
Tim44
Motif
Other DBs
NCBI-ProteinID:
ADL25337
UniProt:
C9RNE4
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Position
1393672..1396290
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AA seq
872 aa
AA seq
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MAEQNKRILKDFLNELIEKFNGHRSDISSEDVLEQFMAWAETRGTTLYPAQEEAILELLD
GKNVILNTPTGSGKSMVALALHFDSLVHNRRSVYTCPIKALVNEKWMALCKEFGAENVGL
STGDATVNRDAPIICCTAEILSNMALCEGETLTITDIVMDEFHYYSDKERGVAWQVPLLT
LPQSRFLLMSATIGATEFFERDMTKHTGRESVTVRSTQRPVPLDFSYSTTEISTEVQKLV
NEGKAPIYVVHFTQAAAASNAQNFMSLDLCTKEEKVKINEAIKEVRFASPYGPDVKRWLK
QGIGLHHAGLLPKYRILCEKLAQQGLLKVICGTDTLGVGVNVPIRTVLFTQLCKYSGDKT
AILTARDFHQIAGRAGRKGFDNVGYVVAQAPEHVIENLKLEAKSRTTGKKFQKRKPPEHG
YIPFDENTFKRLIESAPEPLTSSFQVNHGMLLNILSRPTDGCRAMRALLKDCHESAASKK
QLQHRAFLLFRSLVEKKIIEFVPAVAEGYSHLRVNMNLQDDFSMNQPLSLYLLDTLPKLD
KDSPEYALDVITLCESILENPEAILRIQQSKARDARMNELKAQGMEYNQRLEELEKVEYP
KPLRDFIYDTFDAFADIHPWVDENIEPKSIVREMFENFTTFSGYVKQYNLQRMEAILLRH
LNGVYKVLSQTVPDGYKNEELLEMQDYLSEMIRRVDSSLLEEWEKMAHPEDYQKRLDEGA
SEDEVEKAFGADKAAADITYDKKRFLNMVRQRIFQIMMSLQKQDFSDVLDSLADDLAEGE
LLADDEGTPWTEKRLLETMAAYTAEHHKFRMDVEGRALSHTIVTYEGNIMQIQQMLQDEE
GFNDWSIDFTVNLDESREAGMPLLKLARIGEV
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcaaaacaagcgaatcctcaaagattttttgaatgaactgattgagaagttc
aacggacaccgttccgatatttcatccgaagacgttttagaacaatttatggcatgggcc
gaaacccgtggtacaacgttgtacccagcgcaagaagaagcgattttggagcttttggac
ggcaagaacgttatcctcaacacgccgaccggaagcggaaagtccatggtcgcgctcgct
ttgcattttgacagccttgtacacaaccgtcgcagtgtttatacctgccccatcaaggct
ctcgtgaacgaaaaatggatggcgctatgcaaggaattcggcgccgagaacgtcgggctt
tcgaccggtgatgcaaccgtcaaccgagacgcccccatcatctgctgcacggcagaaatt
ctttcgaacatggcgctctgcgaaggcgaaacgctcaccattacagacatcgtgatggac
gaatttcattattacagcgacaaggaacgcggtgttgcctggcaagttccacttttgaca
ctcccgcaatcgagattcctcttgatgagcgcaacaattggcgctacggaattttttgaa
cgcgacatgactaagcatacaggccgcgagtccgtaaccgtccgttccacgcaacgcccg
gtgccgcttgactttagctacagcactaccgaaatttcgaccgaagtgcaaaaactcgtg
aacgaaggcaaggctcctatttacgttgtccactttacgcaggcggctgctgcaagcaac
gcccagaactttatgagtcttgacctctgcaccaaggaagaaaaagtcaagattaacgag
gcaattaaagaagtccgttttgcaagcccgtatggtcctgatgtcaagcgctggctcaag
cagggcatcgggctgcaccacgcaggacttttaccgaagtaccgcattctctgcgaaaaa
ctcgcccagcaaggtttgctcaaagtcatttgcggaacagacacgcttggcgtgggcgtg
aacgtaccgattcgcaccgtgctttttacgcagctctgcaagtacagcggtgacaagacc
gccattttgaccgctcgcgactttcaccagattgcaggccgcgcaggccgtaaaggtttt
gacaatgtcggctacgttgtcgcacaagcgcccgaacatgtcatcgagaatttgaagctt
gaagcgaagtcgcgcacgacaggcaaaaaattccagaagaggaaaccgcctgaacacggt
tacattccgtttgacgaaaacacgttcaagcgtttgattgaatccgcaccggaaccgctg
acatcaagcttccaggtgaatcacgggatgcttttgaacatcttgagccgcccgaccgac
ggttgccgcgctatgcgagcactcctcaaggattgccacgaaagtgcagccagcaagaag
cagttgcagcaccgcgcatttttgctgttcaggagtctcgtcgaaaagaagattattgag
ttcgtgcctgccgttgccgaaggttacagccacttgcgcgtgaacatgaacttgcaagat
gacttttcgatgaaccagccgctttcgctgtacctgctcgacacgctcccgaagcttgac
aaggattcgccggaatacgcactggacgtgattaccttgtgcgaaagcatcctcgaaaat
cccgaagcgattttgcgcatccagcagagcaaggctcgcgacgcccgtatgaacgagctc
aaggcacaaggcatggaatacaaccagcgcctcgaagaacttgaaaaagtcgaatacccg
aaaccactgagagactttatttacgacacgttcgatgcttttgccgacattcatccgtgg
gtggacgaaaacattgaacccaagtccatcgtgcgcgagatgttcgagaatttcacgacg
tttagcggttacgtaaagcagtacaacttgcagcgcatggaagcgattttgcttcgccat
ttaaacggcgtttacaaagtgctttcgcagaccgtgcctgacggctacaagaacgaagaa
ctcttggaaatgcaggactacctcagcgaaatgatccgccgcgtggactccagtttgctc
gaagaatgggaaaagatggcgcacccggaagattaccagaaacgcttggacgaaggcgct
tccgaagacgaagtcgaaaaggcattcggtgcagacaaggctgccgccgacattacctac
gacaagaagcgattcctcaacatggtacgccagcgcattttccagattatgatgagcttg
caaaagcaggacttttcggacgttctggacagcctcgccgacgaccttgccgaaggcgaa
cttttggcggatgatgaaggtacgccgtggaccgagaagcgtttgcttgaaacgatggcc
gcctacactgccgagcatcacaagttccgcatggacgtggaaggtcgtgctctcagccat
accatcgtcacgtacgaagggaacattatgcagatacagcaaatgctccaagacgaagaa
ggattcaacgactggagcattgatttcacggtcaatctcgacgaaagccgagaagccgga
atgccattgttaaagcttgcaagaatcggcgaagtttaa
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