Fibrobacter succinogenes: FSU_2317
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Entry
FSU_2317 CDS
T02105
Name
(GenBank) putative nitrogen fixation protein
KO
K02584
Nif-specific regulatory protein
Organism
fsc
Fibrobacter succinogenes
Pathway
fsc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fsc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FSU_2317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fsc03000
]
FSU_2317
Transcription factors [BR:
fsc03000
]
Prokaryotic type
Helix-turn-helix
Other families
FSU_2317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
AAA
AAA_19
GAF_3
AAA_30
AAA_16
nSTAND3
HTH_30
AAA_2
TIP49
Motif
Other DBs
NCBI-ProteinID:
ADL26291
UniProt:
D9S477
LinkDB
All DBs
Position
2688094..2689617
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AA seq
507 aa
AA seq
DB search
MPSSIGPEISVIQKISVAIIHERDVEKLLENVLGILESELGMLRGTFALLFGDTLKIEAS
RGLDETEKQRGFYRMGEGITGHVAERGLSHVIPDLRKDSRFLNRTGSRHYETQVAFICVP
LIHDGQVIGTLSIDRPVDGSTDLDRDVALLEIIANITGDAANECIELHGEREAMLEENRK
LRDMLSNNPGELVGNCREMRQVYEQVRQVAPSDATVLIRGGSGTGKEMIARAIVNLSARK
DKPFITLNCAALPENLVESELFGHEKGAFTGALNRRIGRAEAANGGTLFLDEVGDLTMQT
QVKLLRFLQERTFSRVGSNEELHSDVRFLAATSRNLEELIAQGKFREDLFYRLNIFPITM
PDLAKRKSDIILLAEHFIEKMNLRYNKKVGRLSTTAINLLMSYHWPGNVRELENCIERGV
LTATDDCIHSYNLPPSLQTSLSVGSVGGTPSDKIAPLEVMMDNYEREIITEAIKRNDGNI
SAAGRDLGVSPRMMNYRMNKLGIKLGR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgccctcctctattggtcctgaaatttcggtcatccagaagattagcgttgcgattatt
cacgagcgcgatgtggaaaagttgctcgagaatgtccttggcattttggaatccgaactt
ggaatgttgcgcggaactttcgcgttgctttttggcgatacgctgaaaatcgaagcttcg
cgcgggcttgacgaaacggaaaagcaacgtggcttttaccgtatgggcgaaggcattacg
ggacatgtggccgagcgtggcttgagccatgtgattccggacttgcgtaaggattccagg
ttcttgaaccgtacgggtagccgccattacgaaacccaggtggcatttatctgcgttccc
ctgattcatgatggtcaggtcattggaacgctctcgattgaccgcccggtggacggttca
accgatctggatcgcgatgtggccttactcgaaattattgcaaacatcacaggcgatgcg
gctaacgaatgcattgaactccacggtgaacgtgaggcgatgcttgaagaaaaccgcaag
ctccgcgatatgctttcgaacaaccccggcgaactggtgggtaactgccgagaaatgcgc
caggtgtacgaacaagtgcgccaggtggcgcctagcgatgcaacggtcttgattcgcggc
ggtagcggtacgggtaaggaaatgattgcccgtgcgattgtgaacttgtctgcgagaaag
gataagccgttcatcacactgaactgtgctgctctcccggaaaaccttgttgaaagtgaa
ctttttggtcatgaaaagggcgcctttacgggtgccttgaatcgccgtattggccgtgct
gaagcggcaaatggcggtacgcttttcttggatgaagtgggcgacctgacgatgcaaact
caggtgaagctcttgcgctttttgcaggaacgcacctttagccgtgtcggtagcaacgaa
gaactccattcggatgtgcgcttcttggcggcgactagccgtaatcttgaagaactcatt
gcgcagggcaagttccgtgaagaccttttctatcgcctgaacattttcccgatcaccatg
ccggacttggccaagcgtaaatccgacatcatcttgcttgcggagcacttcattgaaaag
atgaacttgcgctacaacaagaaggtgggtcgcctttcgacgacggctattaatttgctc
atgagctatcactggccgggcaacgtgcgtgaactggaaaactgcatagaacgtggcgtg
cttacggcaacggatgattgcattcatagctacaacttgccgccttcgctccagacgagc
ctgagcgtaggctctgtgggcggaaccccgagtgacaagattgcgcctctcgaggtgatg
atggataactatgaacgtgaaatcattactgaagcgattaagcgcaatgacggtaacatc
tctgcagcagggcgcgatttgggggtctctccgcgcatgatgaattaccgcatgaacaag
cttggaattaagctcggtcgatag
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