Fibrobacter succinogenes: FSU_2428
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Entry
FSU_2428 CDS
T02105
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fsc
Fibrobacter succinogenes
Pathway
fsc03410
Base excision repair
fsc03430
Mismatch repair
fsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FSU_2428 (recJ)
03430 Mismatch repair
FSU_2428 (recJ)
03440 Homologous recombination
FSU_2428 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsc03400
]
FSU_2428 (recJ)
DNA repair and recombination proteins [BR:
fsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FSU_2428 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FSU_2428 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FSU_2428 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ADL26475
UniProt:
C9RIN9
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All DBs
Position
2813165..2814877
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AA seq
570 aa
AA seq
DB search
MEDLVASTLSSTLKIPHAVARFLVSRGIKTVSDAYHMLCSSESDVHDPFLMMGMDKAVEW
ILAVRERGERVFIFGDYDLDGMTSVTLLTRCLKTVGIESEWRLPNRFGDGYGLSVSAVDE
MYEAGARNLITVDTGITANVEIAHAKELGMAVMVMDHHQPSGDGLPVSDVLLDPHQEGDN
YPNPELCGVGVSYKFICALFSRLGIKAPVEYLDLVALGTLADLVQMTPENRYFTRTGLES
LKNSRWPGVQEMYTSLMKPHSCVGGIDVMYKLAPLLNAPGRMERPDPALKLLLCENKGEA
GKLLEELKDWNARRKQKEAEITEMAMEQVKALYGDTIPTVIVVAGENWHVGVIGIVAAKL
AQEFHRPSAVLSIINGMAHASARAVPGFNWHKALFDSRELFDRWGGHANAAGFSLEAGKI
EELRGRLLQSAKDQGYTGEVINTDESYPYDIKIALRELTVETRVPTGRYPIRERSILEFI
DLLEPFGGNFPYPAFRAENVTVHRVRELRGGHLQMEISQAGSAVFPAIAFGLRKSKALLG
RSRPVTVVFEPIWNYYNNTKTVQLCIKSIE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcttgtcgcctcaactttgtcctctacgctaaagattccgcatgcggtcgcg
aggttcttggtctcgcgcggcatcaagactgtttctgatgcgtaccacatgctgtgctct
agcgagagcgacgtgcatgaccccttcctcatgatggggatggacaaggctgtggaatgg
atacttgcggttcgcgaacgtggcgagcgcgtgttcatttttggcgactacgacctggac
ggcatgacgtccgtgacgcttttgacccgctgcttaaagactgtgggtattgaatctgaa
tggcgactcccgaaccgctttggcgatggctacggactttcggtttctgccgtcgacgaa
atgtatgaggcgggtgctcgcaacttgattaccgtggatacgggcattaccgcaaacgtg
gaaattgcacatgccaaggaactcggcatggcagtcatggtcatggaccatcatcagccg
tcgggcgatgggctcccggtaagcgatgtgcttttggacccgcatcaggaaggcgacaat
tacccgaacccggaactttgcggtgtcggcgtttcgtacaagtttatttgcgccttgttt
agccgacttggcataaaggctccggtggaatatctggacttggtcgccctcgggacgctt
gcggaccttgtgcagatgacgcctgaaaaccgctattttacgcgtaccgggctcgaaagt
ctcaagaacagccgttggcctggcgtacaagaaatgtacacctccctcatgaaaccccat
agctgtgtgggtggcatcgacgtgatgtacaagcttgcaccgctcctcaacgcacctggc
cgcatggaacgcccggacccagccctcaaacttcttttgtgcgaaaacaaaggcgaggca
ggcaagctcttggaagagctgaaagattggaacgcccgccgcaagcaaaaggaagccgaa
atcaccgaaatggcgatggaacaggtcaaggctctttacggcgacaccatcccgaccgtg
attgtagttgccggcgaaaactggcatgtgggcgtgattggcattgtcgcggcaaagctt
gcccaggaattccacaggccttcggccgtgctgtcaattatcaacggcatggctcatgcg
agcgcccgtgcagttcctggattcaactggcacaaggccctttttgacagccgtgaactt
tttgatcgctggggcggacacgccaatgcggcgggattttcgctcgaagcgggcaagatt
gaagaactccgcgggcgccttttgcaatccgcaaaagaccagggctataccggcgaggtg
atcaacactgatgaatcgtacccgtacgacatcaagattgcgctccgcgaactgaccgta
gaaacgcgtgtgccgacagggcgttatccgattcgtgaacgctcgattctcgagttcatc
gacttgctcgaaccgtttggcggaaacttcccgtatcccgcattccgtgccgaaaacgtg
accgtccatcgcgtgcgtgaacttcgcggcggacacctgcagatggaaatttcgcaggcg
gggagtgccgttttcccggctatcgcctttggactgcgcaagagtaaggctttgctcggg
cgctcccgcccggtgacggtcgtattcgagccgatttggaattactataacaacaccaag
acggtgcagctttgcatcaagtccatcgagtag
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