Fibrobacter succinogenes: FSU_2507
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Entry
FSU_2507 CDS
T02105
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fsc
Fibrobacter succinogenes
Pathway
fsc03030
DNA replication
fsc03430
Mismatch repair
fsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FSU_2507
03430 Mismatch repair
FSU_2507
03440 Homologous recombination
FSU_2507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsc03032
]
FSU_2507
03400 DNA repair and recombination proteins [BR:
fsc03400
]
FSU_2507
Enzymes [BR:
fsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FSU_2507
DNA replication proteins [BR:
fsc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FSU_2507
DNA repair and recombination proteins [BR:
fsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FSU_2507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADL25300
UniProt:
C9RIV2
LinkDB
All DBs
Position
2888585..2889151
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AA seq
188 aa
AA seq
DB search
MLKFAVVDLETTGGHGEDNRIMEIGIALMDGSEIVETYHALVDPGKPITPFVRELTGITD
EMVSGQPQFGVIAEHVAALLQDRIFVAHNVQFDCKYMTAELKRCCIKFNPARLCTVKLSR
RVFPGQPSYSLHKLTESLGLPDFNHHRALDDTLAAAAILRSALEKVGEAGVMKNVVNISV
AKKQAFNK
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
ttgctaaaatttgcggtagtcgatctcgaaacgaccggcggacatggtgaagataatcga
ataatggaaatcggaatcgccctgatggacggttccgaaattgttgaaacgtaccacgcg
cttgtagacccaggaaagccgataacgccgtttgtgcgagagcttacgggcatcaccgac
gagatggttagtggacaaccgcaatttggcgtgattgctgagcatgtggctgctttattg
caagaccgcatttttgtagcgcacaacgttcagtttgactgcaagtacatgactgcggaa
ctgaaacgctgctgcatcaagttcaaccctgcgagactttgtacggtaaagctttcgcgg
cgtgtgttcccggggcaaccgagctacagtttgcacaaactcacggaatcgctagggctc
cctgattttaaccatcaccgtgctttggacgatacgcttgcggcggctgccattttgagg
tctgcgctggagaaagttggcgaggcgggcgtgatgaagaacgtcgtgaatatctccgtc
gccaagaagcaggcttttaacaagtag
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