Fibrobacter succinogenes: FSU_2682
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Entry
FSU_2682 CDS
T02105
Name
(GenBank) putative helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
fsc
Fibrobacter succinogenes
Pathway
fsc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fsc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FSU_2682
09124 Replication and repair
03420 Nucleotide excision repair
FSU_2682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fsc03021
]
FSU_2682
03400 DNA repair and recombination proteins [BR:
fsc03400
]
FSU_2682
Enzymes [BR:
fsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FSU_2682
Transcription machinery [BR:
fsc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FSU_2682
DNA repair and recombination proteins [BR:
fsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FSU_2682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Tfb5
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ADL26012
UniProt:
C9RK00
LinkDB
All DBs
Position
complement(3100381..3102156)
Genome browser
AA seq
591 aa
AA seq
DB search
MNPNGAIIVQSNLEIMVEVDNPNYTTARDAIAPFTELVKSPEHLHTYKISHLSLWNAAAT
GLRAPEVLERLESQSRYPIPPTVVTEIEDYMARYGLLRLKKEDDRLLMESDDKLMFLEIC
KLKDVEPFIIEHIDDTHVVVDPERRGHLKMVLTNAGFPVEDLAGYTVGDPLPIQLRETTV
SGKPFKLRDYQKDAAQVFYASGSEKGGSGVIVLPCGSGKTVIGLATMALVQTKTLILTPN
ISSSRQWIREICDKTNLTLDQVKEYSGEVKEIGPVTVATYQILTQRKRAKKGDENKEGKE
PEMTEEEVKKELANFPLFSQEKWGLMIYDEVHLLPAPVFRLSTEMQATRRLGLTATLVRE
DHKETEVFSLIGPKKFDIPWRILEAQGWIATADCNEIRIPMDPELKMKYALAPVRDKITL
ASTNPEKTDIVERLLKYFSKPDDRVLIIGQYIDQLEALSEDLQIPLITGKTPNKEREKLY
GAFRSGAQKNLMVSKVGNFAIDLPDANVLIQISGTFGSRQEEAQRLGRVLRPKSDGGAAH
FYSIVTQDSKEQEFAMNRQLFLTEQGYAYKIIKRGDWDILMRTPEELAARA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgaatggcgcaataattgtacaaagtaacctcgaaattatggtcgaggtcgat
aatcctaattacactaccgcacgtgatgcaatcgctccttttacagagcttgtcaaaagc
ccagagcacctgcacacttacaagatttctcatttgagcttgtggaacgctgccgcaaca
ggcctccgcgctcccgaagttctcgaaagactcgagagccagagccgctaccccattccg
ccgacggtcgtcacggaaatcgaagactacatggctcgttacggtttacttcgtttgaaa
aaagaagacgaccgcttgttgatggaatctgatgataaattaatgttccttgaaatttgc
aagctcaaggacgttgaaccttttattatcgagcacattgacgatacgcacgtcgtcgtt
gacccggaacgtcgtggtcatttgaaaatggtcctcaccaacgctggtttcccggtcgaa
gacttggccggttataccgttggcgacccgctccccatccagctccgcgaaacaaccgtt
tccggcaagccgttcaagctccgcgattaccagaaggatgccgcacaggtattctacgcc
agcggtagcgaaaagggcggttccggcgtgattgttctcccctgcggttccggtaagacg
gtgattggccttgccacgatggctttggtacaaactaagactttgattttaacgccgaac
atttcgtcttctcgtcagtggatccgcgaaatctgcgacaagacgaaccttacgcttgac
caggtcaaggaatactccggcgaagtgaaggaaatcggtccggtgaccgttgccacgtac
cagattttgacgcagcgcaagcgcgccaagaagggcgacgaaaacaaggaaggcaaggaa
ccagaaatgaccgaagaagaggtcaagaaagaacttgcaaacttcccgcttttcagccag
gaaaagtggggcctcatgatttacgacgaagtccacttgctcccggctccggtgttccgc
ttgagtaccgaaatgcaggccactcgccgcctgggccttacggcaacgctcgtccgtgaa
gaccacaaggaaaccgaagtgttcagtttgatcggaccgaaaaagttcgacattccttgg
cgcatcttggaagcccagggctggattgccaccgccgactgtaacgaaatccgcatcccg
atggatccggaactcaagatgaagtacgcccttgctccggtgcgcgacaagattacactc
gcaagcacgaaccccgaaaagacggacatcgtcgaacgcttactcaagtacttcagcaag
cccgatgaccgcgtgcttatcatcggccagtacattgaccagcttgaagcactttccgaa
gacttgcagattccgctgattaccggcaagacgccgaacaaggaacgcgaaaagctttac
ggagccttccgttcgggcgcgcagaagaacctcatggtctcgaaggtcggtaacttcgct
atcgacttgccggacgccaacgtgcttatccagatttcgggtacgttcggtagccgccag
gaagaagcccagcgcctcggccgcgtattgcgtccgaagagcgacggcggcgccgcccac
ttctacagcatcgtgacgcaggactccaaggaacaggaattcgcgatgaaccgtcagctg
ttcctcacggaacagggctatgcctataaaatcatcaagcgcggcgactgggacattctt
atgaggacgcccgaggaactcgccgcaagagcatag
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