Fibrobacter succinogenes: FSU_2936
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Entry
FSU_2936 CDS
T02105
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV (phage-T(4)-induced)
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
fsc
Fibrobacter succinogenes
Pathway
fsc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FSU_2936 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsc03400
]
FSU_2936 (nfo)
Enzymes [BR:
fsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
FSU_2936 (nfo)
DNA repair and recombination proteins [BR:
fsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FSU_2936 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADL26576
UniProt:
C9RL20
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All DBs
Position
3391747..3392574
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AA seq
275 aa
AA seq
DB search
MHIGCHLSSSGGFLAMGETALSIGADTFQFFTRNPRGGAAKPFDKADAEALNAFMDAHSF
APILAHAPYTLNACAADPSLRQYAQDVMKDDLFRMDHFPHAMYNFHPGSHVKQGVDVGIE
LISQHLNNILHKDLKTKVLLETMAGKGSEIGRTFEELRAIIDRVELSEKVGVCLDTCHVF
DGGYDIVNHLDDVLESFDKVFGLKRLRAIHLNDSKNPMGSHKDRHEVIGGGNIGLEALVN
VVNHPALKGLPFYLETPNELPGYAAEIALMRSRER
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcatattggttgtcatctctcgtcttcgggcggctttttggcgatgggcgagacagcc
ctttccattggggccgatacgttccagttctttacgcgaaacccgcgcggtggggccgca
aagccgtttgacaaggctgatgccgaagcgctaaatgcgtttatggacgctcacagcttt
gctccgattttagcgcatgctccatacacgttgaatgcttgtgctgctgatccgtcgctg
aggcaatatgcacaagatgtgatgaaagatgacttgttccgcatggatcatttcccgcat
gcgatgtataactttcatccgggcagtcatgtgaagcaaggtgttgatgtcggaatagaa
ctcatttcgcagcacctgaacaacattttgcataaagacctcaagacgaaagtgcttttg
gaaacgatggcgggcaaggggagtgaaattggccgtacttttgaggaattgcgtgcgatt
atagaccgcgttgaactcagcgaaaaagtcggagtctgcctggatacttgccatgtattt
gatggcggttacgacatcgtaaatcatctggatgatgtattggaatcgtttgacaaagtc
tttggtttaaaacgcctgagagcgattcatttgaacgacagcaagaatccgatgggtagc
cacaaggatcgtcacgaagtcattgggggtggaaacatcgggcttgaagctcttgtgaac
gtcgtgaaccatccggcattgaaaggacttccgttctatctggaaactccgaacgagttg
cctggatacgccgcagaaattgccttgatgcgaagccgtgaacgataa
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