Fibrobacter succinogenes: FSU_3108
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Entry
FSU_3108 CDS
T02105
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fsc
Fibrobacter succinogenes
Pathway
fsc03420
Nucleotide excision repair
fsc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FSU_3108 (pcrA)
03430 Mismatch repair
FSU_3108 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsc03400
]
FSU_3108 (pcrA)
Enzymes [BR:
fsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FSU_3108 (pcrA)
DNA repair and recombination proteins [BR:
fsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FSU_3108 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
FSU_3108 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DEAD
PcrA_UvrD_tudor
ResIII
AAA_11
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ADL25971
UniProt:
C9RM93
LinkDB
All DBs
Position
3585784..3588315
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AA seq
843 aa
AA seq
DB search
MDDFVECNVVDDSVLDKELNPEQAAAAKKINGPMLILAGAGSGKTRCITYKIAHLVSYHK
IDSNRVLAVTFTNKAAREMKDRIQKLLNCRKPFTWMGTFHSVCLKLLKLCLAKESVIKAL
GGKWFDANFSIYDDDDQKRILKEILKDDLGDDYDVNELKKVHSAISRFKNTVLYKNDKAV
LQTPDVAALNAEFADEERKARYYAAYQKKLAESNAMDFDDLLFNTVRMLQMVPNLAEQLR
ERFQYVVVDEYQDTNDVQYELLKLLINRDTKNVTVVGDDDQSIYGWRGANIKIIRNFHRD
FAPVTIVKLERNYRSTANIVKGAGSVIAHNVRPAEMQKNVFSKEEAGELIHVRYFEDDRA
EASNIAKTVAQAGPDFYAKTAIFYRTNAQSRVLEKALNDLRIPSVIFGGTRFWDRKEIKD
VLAYLRVLANEKDDAAYLRVINTPPRAIGKTTVEGVLAKVKAGEGSFWDNLLAEANGTGR
GAPKLKVFTDLVTNWKNMMTSGEYPLPILAEHIINDTGYKDFLRKEDEVTADERIANLDE
MINAIREFDEEHPGATLDAFLQDISLLTDGDKKVDTSKGLVTLMTIHMAKGLEFNTVHLA
GCDDEIFPLVRGTSMLSMAEINEQMEEERRLFYVGCTRAEKKLYLYHAERRFFQGNIRPF
APSRFLKELDPSVVDFTPCLNTRPSVPDFVGNTRSKPSYGSYGSSNYGSRPSYGNSGSGN
SYGNRSFGGASHGSSFGGSRSGFGGSSFGSRPAPVPASIKKNDKHIVYRNPVKVVKAPAP
SGPTIEYDNPYHEGARVRHSRYGTGVIMKAYGSGDNARVDVRFDRENMNRTIILKYAALE
VIG
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggacgattttgtagaatgcaatgttgttgatgatagtgttttagataaagagttgaac
ccggaacaggccgctgccgcgaagaaaattaacggcccgatgctgattttggccggtgca
ggttctggaaagacgcgttgcattacttacaagattgctcacctggtttcgtaccacaag
attgattccaaccgcgtgctggcagtgacttttacgaacaaggccgctcgcgaaatgaag
gaccgtatccagaagcttttgaattgccgtaagccgttcacgtggatggggacgttccac
tctgtttgccttaagttattgaaactctgcttggcgaaggaatctgtaatcaaggctctt
ggcggcaagtggtttgatgcaaacttctccatttacgatgatgatgaccagaagcgcatc
ctcaaggaaatcttgaaggacgatcttggcgacgattatgacgtgaatgaattgaagaag
gttcatagcgcgatttcccgtttcaagaatacggtcttgtacaagaacgacaaggcggtt
ttgcagactccggatgtggctgcattgaacgctgaatttgccgacgaagaacgcaaggcg
cgctattacgctgcttaccagaaaaagcttgcggaatcgaacgcgatggactttgatgac
ttgctgttcaatacggttcgcatgttgcagatggtcccgaatttggcagaacagctgaga
gaacgtttccaatacgttgttgtggacgaatatcaggatacgaatgacgtccagtatgaa
cttttgaagttgctcatcaacagggatacgaaaaacgtaacggtggtgggcgatgacgac
cagagtatttacggttggcgtggcgcaaacatcaagattatccgtaacttccaccgcgat
tttgctccggtgacgattgtcaagctcgaacgcaattatcgctcaactgcaaacattgtg
aagggcgcaggttccgtgattgcgcataacgtccgccctgccgaaatgcagaagaacgtg
ttctccaaggaagaagcgggcgagcttattcacgtgcgctattttgaagatgaccgtgcc
gaagcatcgaacattgcaaagacggtggctcaggcgggtcctgatttttatgccaagacg
gcaattttctaccgcacgaacgcgcagtcccgagtgcttgaaaaggcgctcaacgatttg
cgcatcccgtcggtgatttttggcggtacaagattctgggaccgcaaggaaatcaaggat
gtgcttgcctacttgcgtgtgctcgccaacgagaaagacgatgccgcttacttgcgtgtg
attaacactccgccgcgtgccatcggcaagacgacagtcgaaggcgtgctcgccaaggtg
aaagcgggcgagggttcgttctgggacaatttattggccgaggcgaacggcacggggcgc
ggcgctccgaagcttaaggtttttacggaccttgtgacgaactggaagaacatgatgact
tctggtgagtatccgctcccgattcttgcagaacatatcatcaacgatacgggctataag
gacttcttgcgcaaggaagacgaagtcacggctgatgaacgcattgcgaacttggacgaa
atgatcaacgctatccgtgaatttgacgaagaacatccgggggctactctcgatgcgttc
ttgcaggatatttcgcttttgacggatggcgacaagaaggtcgatacatcaaagggcctt
gtgacgctcatgacgatccacatggcaaagggcttggaattcaatacggttcacctggcg
ggctgcgatgatgaaatcttcccgctcgtgcgtggaacttctatgctctcgatggcagaa
atcaacgagcagatggaagaagaacgccgcctgttctatgtgggctgcacccgtgctgaa
aagaaactttatctgtaccatgcggaacgcaggttcttccaggggaacatccgtccgttt
gcgccgtcgcgcttcctcaaggaattggatccgtccgttgtcgactttacgccgtgcttg
aatacacgtccgtctgttcctgattttgtcggcaatacgcgctccaagccgtcttacggt
tcgtacggctcgtcaaactatggctctcgtccgtcctatggaaattcgggctcgggcaac
tcttatggcaaccgctcgtttggcggcgcctcccacggcagtagctttggcggatctcgt
agcggttttggcgggtcttcgtttggctctcgtcctgcgcctgtgccggcgtccatcaag
aagaacgataagcacattgtctaccgcaatccggtgaaggttgtaaaggctcctgctccg
tctggtccgacaatcgagtacgataatccgtaccacgagggcgcccgcgttcgccattcc
aggtatggaacgggtgtgattatgaaggcttacggcagtggcgataacgcccgcgtcgat
gtgcgcttcgaccgcgagaacatgaaccgcaccatcatcctcaaatacgctgctttggaa
gtgattggatag
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