Fibrobacter succinogenes: FSU_3135
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Entry
FSU_3135 CDS
T02105
Name
(GenBank) pectate lyase family protein/carbohydrate-binding protein, CBM6 family
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fsc
Fibrobacter succinogenes
Pathway
fsc00040
Pentose and glucuronate interconversions
fsc01100
Metabolic pathways
fsc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fsc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
FSU_3135
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FSU_3135
Enzymes [BR:
fsc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
FSU_3135
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GFIT
Motif
Pfam:
Pectate_lyase_4
CBM_6
CBM_35
Por_Secre_tail
CBM13-like
CBM_35_2
CIF
Ig_J
Motif
Other DBs
NCBI-ProteinID:
ADL26030
UniProt:
C9RMB8
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Position
3613243..3614934
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AA seq
563 aa
AA seq
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MFEASNRILAVLCGLAVCASAAVDQCKSIGWATRSGRTSTEFNVTGGGNATPITVTTFAD
LQKYAKDSSPRVIYIDGTLGDGWSGRTGDRLNITGSNKTIIGLKPGTVLKAPIHISKASN
IIVRNIVIQGPGSNAEQAWDNLTIENNGSKNIWIDHCEFWDGQDGNADVVKGADNVTFTW
CIFGYKKKSSHNLSNLIGSSDNEPESEGKLNVTYMFNWWQAANQRKPRCRYGNVHVVNNL
LTGNASITNGTDVLGVSAGHMCKVRTERNVFINEANPIYTGNANGTGVNEVIDNIFTNCS
GNTKGTGTSFTPPYEYTSFMLKASEVEAAVKANAGATLKSPTECDANYVEPEPPTPDKQY
QAEKGTITGGVSESSNGGYHGDGYVNFDKGGDVVVNVKVDTAGQYRFDIDFANGSSEARS
LAISAGLDTATTSFKTTGGWTVWETAEVLVNLAAGENAVKFATVGGNDGPNIDQFDVTLV
KAAEKDSSEEKTISIRPKTAAVVEPSVYRVDIFDTKGALVRRMNVESAKVSDVAWMTRGL
PAGLYVMQLKNANTERRKFITVK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagcttcgaatcgaattttagcggtgctgtgcggacttgctgtttgtgcgtct
gcagcggtggatcagtgtaaatcgattggctgggcgactcgttcgggccgtacatcgact
gaatttaatgtaaccggtggcggaaatgcaacacccattacagtgacgacctttgccgat
ttgcaaaagtacgcgaaggattcttctccgcgtgtgatttacatagacggtacgcttggc
gatggctggagcgggcgaacgggggaccgcttgaatatcacgggttccaacaagaccatc
atcggacttaagccggggactgtgcttaaagcgccaattcacatcagcaaggcttcaaac
attatcgtccgcaatatcgtgattcaagggccgggcagtaatgctgagcaggcttgggac
aaccttaccattgaaaataacggttccaaaaatatatggattgaccactgtgaattctgg
gatggtcaggatggcaatgccgatgtggtaaaaggtgcagataacgtaacatttacgtgg
tgcatttttggctacaagaaaaagagttcgcacaacctttcgaatctcatcggcagttct
gacaatgaacccgaaagcgaaggcaagctgaatgtgacctacatgttcaactggtggcag
gcagccaaccagcgcaaaccacgctgccgttacggaaacgttcatgtggtgaacaacttg
cttacgggcaatgctagcatcacaaacggaaccgatgtgcttggcgtttcggctggccac
atgtgcaaagtgcgcacggaacgcaatgtatttatcaacgaagcaaacccaatttatacg
ggcaatgcgaacggcacgggcgtgaacgaagtcatcgacaatattttcacgaattgctcg
ggcaatacaaagggaacggggacttcttttacaccgccgtatgaatacacgagctttatg
ctcaaggcgagcgaagtcgaagctgccgtgaaggcaaatgcgggcgctacgctcaagagt
ccgacggaatgcgatgccaattatgtggaaccggaaccgccgacacctgataaacagtac
caggccgaaaaaggtacgattacaggtggtgtttctgaaagtagcaatggcggctaccac
ggcgatggctatgtgaatttcgataagggcggcgatgtcgtcgtgaatgtgaaagtcgat
acggctggccaatatcgctttgatatcgattttgcaaatggctccagtgaagcacgctct
cttgcgatttctgctggtttagatacggcaacgacatctttcaagacaactggtggctgg
accgtctgggaaacggctgaagtcttggtgaatcttgccgcaggcgaaaatgctgtgaag
tttgcaaccgttggcggtaatgatggcccgaacatcgaccagttcgatgtaacgcttgtg
aaggctgcggaaaaagattcatcggaagaaaagactatatcgattcgtccgaaaacagct
gctgtggttgagcctagcgtttaccgcgtcgacattttcgatacgaagggcgcgttggtg
cgccgcatgaatgtggaatctgcgaaagtcagcgatgtcgcctggatgactcgcggcttg
cctgctggcttgtatgtgatgcagctgaagaacgcaaatacggaacgccgcaagtttatt
actgtgaagtaa
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