Flavobacterium sediminilitoris: LXD69_06795
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Entry
LXD69_06795 CDS
T08185
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fsd
Flavobacterium sediminilitoris
Brite
KEGG Orthology (KO) [BR:
fsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fsd03016
]
LXD69_06795 (truB)
Enzymes [BR:
fsd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LXD69_06795 (truB)
Transfer RNA biogenesis [BR:
fsd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LXD69_06795 (truB)
Prokaryotic type
LXD69_06795 (truB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UOX35217
LinkDB
All DBs
Position
complement(1507320..1508024)
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AA seq
234 aa
AA seq
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MQAEDYLAGQVLLIDKPLHWSSFQAVNKLKYLLKHHYNLPKKFKIGHAGTLDPLATGLLI
ICTGKFTKTISDIQSQVKEYTGTITIGATTPSYDLETEINATFPTNHITPELINETTHQF
LGEIDQKPPVFSAIKKDGKRLYEHARAGEEIEIQSRKTTIYEFEITRIDLPEIDFRVQCS
KGTYIRSLAYDFGLALKSGGHLTALRRTKIGDYSVDKAISPEQFEQHILKGKST
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcagaagattatttagctggacaagttttactaattgacaaaccattacactgg
tcgtcatttcaggcagtaaataaactgaaatacttattaaaacatcattataatttacct
aaaaaatttaaaataggtcatgcaggaacgttagatcctttagctacaggcttattaatt
atatgtacaggtaaatttaccaaaacaatttctgacattcaaagccaagtcaaagaatac
acaggtacaataactataggagcaacaactccttcttatgatttagaaaccgaaataaat
gctacatttccaacgaatcacattactccagaattaattaacgaaactacccatcaattc
ttaggagaaatagaccaaaaacctcccgttttttctgctataaaaaaagatggaaaaaga
ctgtatgaacatgctagagctggtgaagagatagaaattcaatcgagaaaaacaactatt
tacgaatttgaaatcactagaattgatttacctgaaattgatttcagagtacaatgtagt
aaagggacttatattcgttctttagcttatgattttggattagctctaaaatcgggtggg
catttaacagctttacgtagaacaaaaattggtgattattcagttgataaagctatttct
ccagaacaatttgaacagcatattctaaaaggaaaaagcacttaa
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