Flavobacterium sediminilitoris: LXD69_08560
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Entry
LXD69_08560 CDS
T08185
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
fsd
Flavobacterium sediminilitoris
Pathway
fsd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fsd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LXD69_08560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fsd03021
]
LXD69_08560
Transcription machinery [BR:
fsd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LXD69_08560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
PgaD
DUF6285
Motif
Other DBs
NCBI-ProteinID:
UOX35562
UniProt:
A0ABY4HRN9
LinkDB
All DBs
Position
complement(1899350..1900213)
Genome browser
AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQRIKAGDQRALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKMYALLEQSSERAPSAEEIAKELDMTVNDVKESMKNSGRHL
SMDAPLVEGEDSNLYDVLRSGESPNPDRELIHESLQTEIERALETLTPREADVVRLYFGL
GDQHPMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactcaaaattaccaagcaggtaacgaatcgtgaaactgcttccttagacaaa
tatctacaagaaattggaaaagttgaccttattactgcggatgaagaagtagaattagca
caacgtataaaagcaggtgatcaaagagcacttgaaaaattaacaaaagctaatttacgt
ttcgtggtttctgttgctaagcaataccaaaatcaaggacttactctacccgatttaatt
aacgaaggaaatcttggtctaattaaagcggctcaacgttttgatgaaactcgtggtttc
aagttcatctcgtacgcagtttggtggattcgtcaatcaattcttcaagctcttgctgaa
caatcacgtattgtacgtttaccattaaataaaattggttctatcaataaaattaacaaa
atgtatgccttattagagcaatctagtgagcgcgcaccttctgctgaagaaattgcaaaa
gaactagatatgaccgtaaatgatgtaaaagagtctatgaaaaactctggtcgtcattta
tcaatggatgctcctcttgttgaaggtgaagattctaacctttatgacgttttacgttct
ggagaatctccaaatcctgatagagagttaatccatgaatcattacaaactgaaattgaa
agagctttagaaacattaactcctagagaagctgatgtggttcgtttatatttcggatta
ggtgatcaacatcctatgactttagaagaaattggtgaaacttttgatttaacgcgtgaa
cgtgttcgccaaattaaagaaaaagcaatcagaagattgaaacatacttctagaagtaaa
atactaaaaacctatttaggatag
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