Flavobacterium sediminilitoris: LXD69_16105
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Entry
LXD69_16105 CDS
T08185
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
fsd
Flavobacterium sediminilitoris
Pathway
fsd00020
Citrate cycle (TCA cycle)
fsd00480
Glutathione metabolism
fsd00720
Other carbon fixation pathways
fsd01100
Metabolic pathways
fsd01110
Biosynthesis of secondary metabolites
fsd01120
Microbial metabolism in diverse environments
fsd01200
Carbon metabolism
fsd01210
2-Oxocarboxylic acid metabolism
fsd01230
Biosynthesis of amino acids
fsd04146
Peroxisome
Module
fsd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
fsd_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
fsd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LXD69_16105
09102 Energy metabolism
00720 Other carbon fixation pathways
LXD69_16105
09106 Metabolism of other amino acids
00480 Glutathione metabolism
LXD69_16105
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LXD69_16105
Enzymes [BR:
fsd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
LXD69_16105
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Gene cluster
GFIT
Motif
Pfam:
IDH
PDZ_CPAF_rel
DUF5363
Motif
Other DBs
NCBI-ProteinID:
UOX33543
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All DBs
Position
3505770..3507992
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AA seq
740 aa
AA seq
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MSNQPKIIYTITDEAPMLATHSFLPIVKAFSKPANITIETRDISLAGRILANFPEFLNEN
QKIADALTELGQLATTPEANIIKLPNISASVPQLKEAIAELQSQGYAIPNFPEEPQNEEE
KTIKAKYAKVLGSAVNPVLREGNSDRRAPKAVKNYAKAHPHSMGAWSSDSKSHVSHMNDG
DFYGTEKSVTIKDAGSFTIEFTDANGATNILKENSPLKAGEIIDSSVMNMGKLKKFIAEQ
IDDAKAKGVLFSVHLKATMMKISDPLLFGAFVEVYFKAVFEKYATLFEELGIDTRNGLGD
VYAKIQGHAKQAEIEADLTTAIENGPALAMVNSDKGITNLHVPSDVIIDASMPAMIRNSG
QMWNAAGKSQDTKAIVPDRCYAGIYQATIDFCKQNGALDPKTMGSVPNVGLMAQKAEEYG
SHDKTFQMSTNGTVVIKDANGTILMEQAVEAGDIFRMCQVKDAPIQDWVKLAVNRARATG
VPTIFWLDENRAHDRQIIEKVNLYLKDHDTAGLDIRIMNPVDATKFSLERIVKGLDTVSV
TGNVLRDYLTDLFPILEVGTSAKMLSIVPLMNGGGLFETGAGGSAPKHIEQFIEEGYLRW
DSLGEFLALGVSYEHLGNVFNNPKALVLSETLDEATEKFLENDKSPARKIGSIDNRGSHF
YLALYWANALANQDKDAELKAIFSPIATELNANEAKINEELITAQGKPQTIGGYYHPNFD
ATDKAMRPSATLNTILAKLN
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaccaacctaagattatttacactattacagatgaggcaccaatgctagcaact
cattcatttttaccaatagtaaaagctttctcaaagcctgcaaatattacaatagaaaca
agagatatttcattagcaggaagaattttggcaaattttccagaatttttaaatgaaaac
caaaaaatagctgatgctttaaccgaactaggtcaattagcaacaactccagaagcaaat
atcataaaacttccaaatatttctgcttctgtacctcaacttaaagaagctattgcagag
ttacaatcacaaggttatgcaattcctaatttccctgaggaaccacaaaacgaagaagaa
aaaacaataaaagcaaaatatgctaaagttttaggatcagctgttaaccctgttttacgt
gaaggaaactcagatagaagagctcctaaagcagttaaaaactatgcaaaagcacatcca
cattcaatgggagcttggtcttcagattcaaaatcacatgtttcgcacatgaatgatggt
gatttttatggtacagaaaaatcggttacaataaaagatgctggtagtttcactattgaa
tttactgatgctaatggagctactaatattttaaaagaaaattctcctctaaaagcagga
gaaattattgatagctctgtaatgaacatggggaaacttaaaaaattcattgcagaacaa
attgacgatgcaaaagcaaaaggtgttttattttcggtgcatttaaaagcaaccatgatg
aaaatttcagatccattattatttggagcttttgtagaagtttatttcaaagcagtattt
gaaaaatatgcaacattgtttgaagaattaggaatagacactcgcaatggtttaggagat
gtatatgctaaaattcaaggtcatgcaaaacaagctgaaattgaagccgatttaacaact
gcaatagaaaatggaccagctttagcaatggtaaattcagacaaaggaattacaaatcta
catgttccatctgatgtaattattgatgcttctatgcctgcaatgattcgtaattcagga
caaatgtggaatgcagcaggaaaatctcaagatactaaagcaattgttccagatagatgt
tatgcaggaatttatcaagcaaccatagatttttgtaaacaaaatggtgcattagatcct
aaaacaatgggaagtgttccaaatgtaggtttaatggctcaaaaagccgaagaatacgga
tcacatgacaaaacattccaaatgtcaactaacggaactgttgtgataaaagatgcaaat
ggaacaatattaatggaacaagctgttgaagctggtgatatttttagaatgtgccaagta
aaagatgctcctattcaagactgggttaaactagcagttaatagagcaagagctactgga
gttcctacaattttctggttagatgaaaacagagcacatgatagacaaattatagaaaaa
gtaaatttatatttaaaagatcatgacactgctggtttagatattcgcattatgaatcct
gttgatgctacaaaattctcactagaaagaatagtaaaaggattagatactgtttctgta
acaggaaatgttttacgcgattatttaacagacttatttcctattttagaagtaggaaca
tctgcaaaaatgttatctattgttcctttaatgaatggtggtggattgtttgaaacgggt
gctggtggttctgctccaaagcatattgaacaattcattgaagaaggatatttacgttgg
gattcattaggtgaatttttagcattaggcgtttcttatgaacatttaggtaatgttttc
aataaccctaaagcattagtattatctgaaacactagatgaagctacggaaaaattctta
gaaaacgataaatctccagctagaaaaattggaagtatagataacagaggttctcatttt
tatttagcattatattgggcaaatgcattagcaaatcaggataaagatgctgaactaaaa
gcaatcttctctcctatagctacagaattaaatgcaaatgaagctaaaattaatgaagaa
ttaatcactgcacaaggtaaaccacaaactattggtggttattatcatccaaattttgat
gctactgacaaagcaatgcgtccaagtgctactttgaatactattttagcaaaattgaat
taa
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