KEGG   Flavobacterium sediminilitoris: LXD69_16945
Entry
LXD69_16945       CDS       T08185                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
fsd  Flavobacterium sediminilitoris
Brite
KEGG Orthology (KO) [BR:fsd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:fsd02048]
    LXD69_16945
Enzymes [BR:fsd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LXD69_16945
Prokaryotic defense system [BR:fsd02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LXD69_16945
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like ResIII EcoR124_C HSDR_N DEAD UCH
Other DBs
NCBI-ProteinID: UOX33708
LinkDB
Position
3694249..3697383
AA seq 1044 aa
MSFTSEAAFEEALIQALSKKGWENEVLKHPTEKDLLNNWANILYENNRDIDRLGDFPLTE
GEMQQIVEQINTLRTPLKLNGFINGKTVSITRDNPNDILHFGKEVSLKIYDRHEIAAGQS
RYQIAQQPLFKSKSKILNDRRGDLLLLINGMPLIHIELKKSGVSVSQAHHQIEKYARNGI
FSDLFSLVQIFVAMEPEETLYFANPGPDGKFNKDFFFHWADFNNEPINHWSDIASSLLSI
PMAHQLIGFYTVPDDSDGVLKVMRSYQYFAANAISDKVAKTDWKNKNALGGYIWHTTGSG
KTMTSFKSAQLIANSKDADKVIFLMDRIELGTQSLKEYRGFSEEGEDVQATENTSVLVTK
LKSNDPANTLIVTSIQKMSNIKDEDEGLKAHDIELINKKRIVFIVDEAHRSTFGDMLITI
KNTFTSAIFFGFTGTPIQNENQKKLNTTSTVFGDELHRYSIADGIRDKNVLGFDPYKVLT
YKDRDLRRAVALLKAKAVDEAEALDNPKKKEIYLKFMNEVRMAGHVDPSGQYIKGIEDYI
PSSQYDREEHFEMVVTDILENWLRLSQNGKFHAIFATSSIADAIDYYRLLKATKPDLKIT
ALFDPNIDNNGNSEYKEDGLVEIIEDYNERYNQDFNLAKHARFKKDIAARLAHKAPYIRI
ENKPEEQIDILIVVDQMLTGFDSKWINTLYMDKVLKYENIIQAFSRTNRLFGPEKPFGTI
RYYRFPHTMESNINNAIRLYSGDRPVDLFVQHLDSNLNAMNHVFNEIEQLFTTARVDNFE
RLPDDVEERGRFAKLFKEFNLYLEAAKIQGFNWKQLKYSFGTGKDKIEIEVNLDENIYLV
LALRYKELFSGTSGGGTSSEIPFEIEGYLTEIDTEKIDADYMNSRFDKYLKNLKDINVDP
KELQNTLDELHKTFASLTQEEQKFANIFIHDVQSGIAQLKNGKPFREYITEYLFNAKNDQ
IKKIATILGLGETKLRNLMDIGINKTNINDYGRFDELKNTVDKSKAKTYFEKLEGNTIPA
YKVNIRIHNLLEKFIIEGGFEVVE
NT seq 3135 nt   +upstreamnt  +downstreamnt
atgtcgtttacatcagaagccgcatttgaagaagccttaatacaagccctatctaaaaaa
ggttgggaaaatgaagtgttaaaacaccccactgaaaaagacctgttaaacaactgggct
aacattctatatgaaaacaacagagacatagaccgcttgggagattttcctttaacagaa
ggcgaaatgcaacaaattgtggagcaaatcaacaccttgcgtactccattaaagctaaac
ggtttcatcaacgggaaaacggtttccataacacgagataatccaaacgacatcttacat
tttggtaaagaagtgagtctaaaaatatacgaccgccatgaaattgcagcagggcaaagt
cgttaccaaattgcacaacaacccctttttaaaagcaaatcaaaaattttaaacgaccgt
cgtggcgatttgttattgttgattaatgggatgcctttaatccatatcgagttaaaaaag
agtggggtttcggtaagtcaggcacaccatcaaatagaaaaatacgctcgtaatggcatt
tttagcgatttgttttctttagtccaaatctttgtagcgatggaaccagaagaaacactt
tattttgccaatccgggtcctgatggtaaattcaataaagatttctttttccattgggca
gatttcaataacgaacccatcaaccattggagcgatattgcttcctcgttactctctatt
cctatggcacaccaacttattggtttctataccgtgcccgatgatagcgatggagtgtta
aaagtaatgcgtagttaccaatattttgctgctaatgccatatccgacaaagtagccaaa
accgattggaaaaataaaaatgcgttaggcggttatatatggcacactacaggttcaggt
aaaaccatgaccagttttaaatcggctcaattaattgctaattctaaagatgccgacaaa
gtaatctttttaatggatcgtatcgaattaggtacacaatccctaaaagaatatcgtggt
ttttcagaagaaggtgaagacgttcaagcaaccgagaataccagtgttttagtaaccaaa
ctaaaaagcaacgacccagccaatactttgattgtaacttctattcaaaaaatgagtaac
atcaaagatgaagatgaaggtctaaaagcgcatgatattgaactcataaataaaaaaaga
atcgtttttattgtcgatgaagcgcatcgttccacatttggcgatatgttaatcacgatt
aaaaatacatttacttcggccatattttttggttttacaggaacgcctattcaaaacgaa
aaccaaaagaaactaaatactacctcaacagtctttggtgatgaattacaccgttacagt
attgcagatggtattcgcgataaaaacgttttaggtttcgacccttataaagtgctaacc
tataaagacagagatttacgcagagctgttgcactactaaaagcaaaagcagttgacgaa
gccgaagcattagacaatccaaagaaaaaagagatttacctcaaatttatgaatgaggta
agaatggctggtcatgtagatccttcaggtcagtatataaaaggcattgaagattacatt
ccaagctcgcaatacgaccgcgaagaacatttcgaaatggtagtaaccgatattttagaa
aactggttaagactaagtcaaaatggtaaattccacgccatttttgcaacatctagtata
gcagatgctatagactattatcgattactaaaagccacaaaacccgatttaaaaattaca
gcactattcgaccctaatatcgacaataatggaaatagtgaatataaagaagatggctta
gtagaaattattgaagattataatgagcgttacaaccaagatttcaacttagcaaaacat
gcacgttttaaaaaggatattgctgctcgtttagcacacaaagcaccttatatccgtata
gaaaacaaaccggaagaacaaattgatattttgattgtagttgaccaaatgttaaccggt
tttgattccaaatggataaacaccttgtacatggacaaagtgctaaagtatgaaaacatt
atccaagccttttcacgtactaatcgcttatttggccctgaaaaaccttttggtactatt
cgttattatagatttccacatactatggaaagtaatatcaacaatgccatacgattatat
tctggtgatagacctgtcgatttattcgtacagcatttagattccaatttaaatgcaatg
aatcatgtatttaacgaaatcgagcaactttttactacagcgcgagtagataattttgaa
cgcttacctgatgatgtagaggaaagaggaagattcgcaaaattgtttaaagaattcaat
ttatacttagaagctgctaaaatacaaggttttaattggaaacaattaaaatactcattt
ggtacaggaaaagataaaatagaaattgaagtaaacttagacgagaatatttatttagta
ttagccttacgttacaaagagctatttagtggaactagcggtggaggtacttcatcagaa
ataccatttgaaatagaagggtatctaaccgaaattgataccgaaaaaatcgatgcagat
tacatgaattcacgtttcgacaagtatcttaaaaatctaaaagatataaacgtagatccg
aaagaattacaaaacaccttagacgaattgcataaaacattcgcttcgcttacacaagaa
gaacaaaagtttgctaatatttttattcacgatgtacaaagtggtattgcccaattaaaa
aacggaaagccattcagagaatatattactgagtatctattcaatgctaaaaacgaccaa
atcaaaaaaatagcaacgattctcggtttaggtgaaacgaaattgcgtaatctaatggat
attggcatcaataaaacaaatattaatgactacgggcgtttcgatgagttaaaaaatacc
gtagataaatcaaaggcaaaaacctatttcgaaaaattagaaggaaatacaataccagca
tacaaggtaaacattagaattcataaccttctagaaaagtttattattgaaggtgggttt
gaagttgttgagtaa

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