Flavobacterium sediminis: DI487_00685
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Entry
DI487_00685 CDS
T06625
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
fse
Flavobacterium sediminis
Brite
KEGG Orthology (KO) [BR:
fse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fse03016
]
DI487_00685
Transfer RNA biogenesis [BR:
fse03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
DI487_00685
Prokaryotic type
Methyltransferases
DI487_00685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
MMR_HSR1_Xtn
Arf
Gtr1_RagA
Roc
cobW
Ras
GTP_EFTU
ABC_tran
AIG1
AAA
AAA_22
ABC_ATPase
Guanylate_kin
ATP_bind_1
AAA_29
GCV_T
AAA_16
AAA_24
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AWM12529
UniProt:
A0A2U8QR16
LinkDB
All DBs
Position
143266..144657
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AA seq
463 aa
AA seq
DB search
MIPQETIVALATPSGAGAIAVIRLSGKEAIAIAAQVFQSVSGKELSRQKTHTIHLGHITD
EGKVYDQVLVSIFKGPHSYTGENVVEISCHGSTFIQQQIIQLLLRKGAKMAQAGEFTLRA
FLNGKLDLSQAEAVADLIASDNEASHQIAMQQMRGGFSNEIAKLREELLNFASLIELELD
FSEEDVEFADRTAFHELLNRIEFVLKRLIDSFAVGNVIKNGIPVAIVGEPNVGKSTLLNA
LLNEERAIVSDIAGTTRDTIEDELVINGIGFRFIDTAGIRETKDHVESIGIQKTFEKIEQ
AQVVLFLVDSSQLTVDSLEPLKNEAERIKNKYPQKALLVLFNKKDLLSEELISDLRSQIP
NSLFISAKNKEGIDELKNALLSFVNTGALRNNETIVTNTRHYDSLLKALEEIQKVKWGLN
AGISSDLMAIDIRSALHYFGEITGEVTNDELLGNIFANFCIGK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgattccacaagaaactatcgttgccttggctacaccttccggtgccggtgctattgct
gttatccgcctgtcgggtaaagaggctattgctattgcggcacaagtatttcaatcggtt
tccggtaaagaactgagccgacaaaagacgcatacaatccacttaggacatattacagac
gaaggaaaggtttacgatcaggttttagtatctatctttaaaggaccacattcgtatacc
ggcgaaaatgtggttgaaatttcctgtcacggttctactttcatccagcagcagatcatt
caattattgcttcgtaaaggagccaaaatggctcaggcaggtgaatttaccttacgcgct
tttttgaatggaaaactggatctatcacaagcagaagctgtagctgaccttattgccagc
gataatgaagcgagtcaccagattgccatgcagcagatgcgtggtggttttagtaatgag
attgccaaattgcgtgaagaattactcaattttgcttccttaattgaattggaattagat
tttagcgaagaagatgtagaatttgcagacagaacggcttttcatgaactcttaaaccgc
attgaatttgttttaaagcgtttaatcgattcgtttgctgtggggaatgtgattaaaaat
ggtattccggtagcaattgtgggcgaacccaatgtagggaaatcgactttattgaatgcc
ttgctgaacgaggaacgcgctattgtttcggacattgccggaacgacccgtgataccatt
gaagacgaattggtcatcaacggtattggtttccgattcatcgatacggccggaatccga
gaaacaaaagatcatgtggaaagcatcgggattcagaagacttttgaaaagatcgaacag
gctcaggttgtcctttttttggttgacagttctcagctaacagttgatagcttagaacct
cttaaaaatgaagccgagcgtatcaaaaataaatacccgcaaaaagcactgttggtttta
tttaacaaaaaagatttattgtcggaagaactgatttcggatctgagatctcaaattccg
aatagtctattcatttccgcaaaaaataaagagggtattgacgaactgaagaatgctttg
ctttcgtttgtgaatacaggtgccttgcgcaacaatgaaaccattgttaccaatacgcgt
cattatgactcgttgttaaaagcactggaagagatccaaaaagtaaaatggggtttaaat
gccggtatttcatcggacttaatggcgatcgacatccgctcggcattacattattttggt
gagattacgggcgaagtgaccaatgatgaattactaggtaatatttttgctaatttttgt
attgggaagtaa
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