Flavobacterium sediminis: DI487_01440
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Entry
DI487_01440 CDS
T06625
Name
(GenBank) LysR family transcriptional regulator
KO
K21900
LysR family transcriptional regulator, transcriptional activator of the cysJI operon
Organism
fse
Flavobacterium sediminis
Brite
KEGG Orthology (KO) [BR:
fse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fse03000
]
DI487_01440
Transcription factors [BR:
fse03000
]
Prokaryotic type
Helix-turn-helix
LysR family
DI487_01440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
HTH_30
HU-CCDC81_euk_2
HTH_24
Mga
HTH_23
DUF2057
Motif
Other DBs
NCBI-ProteinID:
AWM12664
UniProt:
A0A2U8QS36
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All DBs
Position
319403..320287
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AA seq
294 aa
AA seq
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MFDYRLKVFYTVATRLSFTKAAQELHISQPAVTKHIKEIEQQFNTKLFDRKGTSIQLTQS
GKILYDYAVKIRSIYRDLEFEIHQVNQKQKGKLRIGASTTVAHYILPEILATFHAYYKDI
QIELLTHNTETISSLLENHTIDLGIIEGASQSSLLEYHPFKKDEIVLVAQAQHPLANTTL
KVNDLYAMELVFREPGSGTQEFIEKHLQDKGIILDKLQVIMHLGSSESIKNYLLHSQAMA
FLSISSIFQELQNHTLSIIDIKNFNINRTFQLILPKGERSELITLFMRFLTYNF
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattaccgtttaaaagtattttataccgttgctactcggctgagttttaccaaa
gccgcacaggaattgcatatcagtcagcctgctgtaaccaaacacatcaaagaaatcgag
caacagttcaacaccaaactgtttgaccgcaaaggcacgagcattcaacttacacaaagc
ggtaaaatcttatacgactatgccgtaaaaatcagaagtatttaccgcgatctggaattt
gaaatccatcaggtgaaccaaaaacaaaaaggtaaactcagaatcggtgccagtaccact
gttgcacactatatcttaccggaaattctggctacttttcatgcgtattacaaagacatt
cagattgaactgcttacgcacaataccgaaaccatttcttccttattggaaaaccacact
atcgatctgggcattatagaaggtgcttcacaatcctctcttctggaataccaccctttt
aaaaaagatgaaattgtattggtcgctcaggcgcaacatcctttggccaatacgactcta
aaagtaaacgacctgtatgctatggaactcgtttttcgtgaaccaggttcgggtactcag
gaatttatcgaaaaacatttacaagacaaagggattattcttgacaaactacaggtcatt
atgcacttaggaagtagcgaaagcatcaaaaattacctgttacattctcaggcaatggca
tttttatccatcagcagtatttttcaagaattgcaaaatcatacactctctataattgat
attaagaactttaatattaaccgtacgttccaactcattttacccaaaggcgaacgttcg
gaacttattacgctctttatgcgatttcttacttataacttttag
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