Flavobacterium sediminis: DI487_02560
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Entry
DI487_02560 CDS
T06625
Name
(GenBank) antibiotic ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
fse
Flavobacterium sediminis
Pathway
fse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DI487_02560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fse02000
]
DI487_02560
Enzymes [BR:
fse01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
DI487_02560
Transporters [BR:
fse02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DI487_02560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
RsgA_GTPase
ABC_ATPase
AAA_15
AAA_22
AAA
AAA_29
AAA_16
nSTAND3
APS_kinase
MMR_HSR1
AAA_25
AAA_24
PPV_E1_C
AAA_23
AAA_5
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AWM12858
UniProt:
A0A2U8QRT1
LinkDB
All DBs
Position
535599..537458
Genome browser
AA seq
619 aa
AA seq
DB search
MKKIIKKLMPHVRPLKRHVVWNIIYNVLYALFGTLSFVTLIPLLNVMFDQNQQVSKEPVF
IKQENWYDYVIHISEVFNYVKSFFNYKITSLTENGEPQFALLIVISLVIVTFLLKNLAGY
FASFHMMHLRNGIMASLRQQMYDKIISLPVSFYSEKRKGDVMARMLGDIGEVQNSFFTLL
ELIVKEPLTIVFSIIMMFTFSWQLSLFIFIFIPISGLIISRIGKSLKSQSLRAQNESGYM
ISLAEETLSGLKVVKSYNAEPIFKKNFKGSIQRLLQLSNKIGKKHNLASPMSEFLGIVTI
AVLLWYGGNLVLVEKTLAGTVFLPFMGLAYNILTPAKAISKASYQVKNGIAAAQRVFEIL
EQENTIDSKENALVKDTFDKSITIENINFRYGDENVLKNFSLEVPKGKTVALVGQSGSGK
STIANLLTRFYDVNEGHIKIDGTDIRDWNIHSLRSLMGLVTQDSILFNDTIKNNLLIGKP
DATEEEILEALKIANAYEFIKDLPNGIETNIGDAGGKLSGGQKQRLSIARAVLKNPPIMI
LDEATSALDTESEKLVQVALENMMQNRTSVVIAHRLSTIQKADKIVVMQKGEIVEQGTHA
ELMAKNGTYAKLVSLQSFD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattattaaaaaattaatgccacatgtccgtccgttaaaaagacatgtggtc
tggaatattatctataacgttttatacgctctttttggtacgctatctttcgttaccctt
ataccattactcaatgtaatgttcgatcagaaccagcaagtatcaaaagagccggttttt
atcaaacaagaaaattggtacgattatgtaatccacatcagcgaagtttttaattacgta
aaaagtttttttaattataaaataacgagccttaccgaaaatggcgagcctcaatttgca
ttactaatcgtaatttcattagtaattgttacatttttacttaaaaatttagccggttat
tttgcttctttccacatgatgcacctgcgcaacggcattatggccagtttgcgtcagcag
atgtatgacaaaattatcagtcttccggtttctttttattcagaaaaaagaaaaggtgat
gttatggcaaggatgctcggcgatatcggtgaagttcaaaattcatttttcaccttattg
gaactaattgtaaaagaaccgcttactattgtattttccatcataatgatgtttactttt
agttggcaactaagtcttttcatttttattttcattcctatttccgggttaatcatctcc
agaatcggtaaaagcttaaaatcacaatcgcttcgtgctcaaaatgaaagcggatacatg
atttcattagctgaagaaaccctgagcggacttaaagtagtaaaaagttataatgcagaa
cctatattcaaaaagaattttaagggctctatccaacgcttactacagttatctaataaa
ataggtaaaaaacacaatctggcttctcctatgagtgaattcttaggtattgtcactatt
gcggttctactatggtatggcggaaatcttgtattagttgaaaaaacattagcaggtacg
gtttttcttcctttcatgggattagcatacaatatcttaactccggcaaaagctatttcc
aaagcttcatatcaagttaaaaacggtattgcagctgctcaaagagtttttgaaatatta
gaacaggaaaatacaattgacagcaaagaaaacgccttggttaaggacacttttgataaa
tctattactattgaaaatatcaatttcagatacggagatgaaaatgtattgaaaaacttt
tctcttgaagttcctaaaggaaaaaccgttgctttagtaggacaatccggaagtggaaaa
agtacaattgctaatttattaactcgtttttacgatgtaaatgaaggacatattaaaatt
gacggaactgatatccgcgattggaatattcattctttacgttcattaatgggattggtc
acacaagactctatcttgtttaacgatacgatcaaaaacaatttgctaatcggtaaacct
gacgctactgaagaggaaattttagaggctttaaagattgctaatgcttatgaatttata
aaagaccttccgaatggaatcgagaccaacatcggtgatgccggcggtaaactatcaggt
ggacaaaagcaacgcttatctattgcccgtgcagtcctcaaaaacccaccgatcatgatt
ttagacgaagcaacttctgctttggacactgaaagtgagaaattggttcaggttgctctg
gaaaacatgatgcagaacagaacttctgtggttattgcgcaccgattgtctactattcaa
aaagctgataaaattgtagtcatgcaaaaaggagaaatcgttgagcaaggaacacatgct
gaactcatggcgaaaaacggcacttatgccaaattagtttctcttcagtcttttgattaa
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