KEGG   Flavobacterium sediminis: DI487_02930
Entry
DI487_02930       CDS       T06625                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
fse  Flavobacterium sediminis
Pathway
fse02024  Quorum sensing
fse03060  Protein export
fse03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:fse00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    DI487_02930
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DI487_02930
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DI487_02930
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:fse02044]
    DI487_02930
Enzymes [BR:fse01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     DI487_02930
Secretion system [BR:fse02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   DI487_02930
  Eukaryotic Sec-SRP protein
   DI487_02930
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 cobW AAA_33 nSTAND3 CbiA AAA_17 CLP1_P DUF5693 AAA_24 APS_kinase Antimicrobial17 6PF2K TsaE AAA_18 AAA_31 ATP_bind_1 NACHT NPHP3_N KTI12 KAP_NTPase AAA_16 MMR_HSR1
Other DBs
NCBI-ProteinID: AWM12922
UniProt: A0A2U8QRX9
LinkDB
Position
complement(609711..611051)
AA seq 446 aa
MFDNLTDKLDKAFHILKGHGKITDVNVADTLKEVRRALLDADVNFKIAKEFTNKVKEKAI
GENVLTNLQPGQLMVKIVKDELTELMGGDVAGVNLSGNPSVILMSGLQGSGKTTFSGKLA
NFLKTKKNKNPLLVACDVYRPAAINQLHVVGEQIGVEVYSEPENKNPVEIAQNAIKHAKA
NGFNVVIVDTAGRLAVDEEMMNEIANVHKAIQPQETLFVVDAMTGQDAVNTAKAFNDRLN
FDGVVLTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDVV
SLVERAQEQYNEEEARKLQKKIAKNEFGFDDFLTQIQQIKKMGNMKDLVGMIPGANKALK
DVEIEDDAFKHIEAIIHSMTPEERSKPAIIDGKRKTRIAKGSGTKVEQVNQLMKQFDQMS
KMMKMMQGGAGKNLMRMMGGGMKGMR
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgtttgataatttaacggataaattagacaaagctttccatatattaaaagggcacgga
aaaattacggatgtaaacgttgctgatacgcttaaagaagttcgtcgggcactacttgat
gccgatgttaactttaaaattgcgaaagaatttacaaacaaagtaaaggaaaaagcaatc
ggagaaaacgtattgactaatttacaacccggacaattaatggttaaaatcgttaaagac
gagttaaccgaattaatgggaggtgatgtagcaggagtaaacctgtctggtaacccatcc
gttatattaatgtcagggcttcagggttcgggtaaaacgactttctcagggaagttggcc
aactttttaaaaactaaaaaaaataaaaaccctttgttagtagcctgtgacgtttatcgt
ccggctgcaatcaatcaattacatgtagtaggtgagcaaataggagtagaggtttatagt
gaaccggaaaataaaaatcctgtcgaaattgctcaaaatgcaatcaaacatgctaaagca
aacggttttaacgtagttattgtcgatacagcaggacgtttagcagtcgatgaagaaatg
atgaacgaaattgctaatgttcataaagcgattcagccacaagaaacgttgtttgtggta
gatgcaatgaccggacaagatgctgttaataccgctaaggctttcaatgaccgtctgaat
tttgacggggtggttttaaccaagttggatggtgatactcgtggtggtgccgctatttca
attaaatcggtagtaaataagccgatcaaattcattggtaccggtgaaaaaatggaagct
atagatgtattctatccttcccgtatggccgaccgtattttagggatgggagatgtcgtt
tccctagtagaacgcgcacaggaacaatacaatgaagaagaagcgcgtaaacttcaaaag
aaaattgctaaaaacgaattcggttttgacgatttcttaacacagatacaacagatcaaa
aaaatggggaacatgaaagatttggtcggaatgattcccggtgcaaacaaagcactaaaa
gatgttgaaatagaagacgatgcttttaaacatattgaagctattattcactcaatgacg
cctgaagaaagaagcaagccggctattattgacggtaagcggaaaacgagaatcgctaaa
ggttccggaactaaagtagaacaggtaaatcagttgatgaaacagttcgatcaaatgagt
aaaatgatgaagatgatgcaaggaggtgccggaaagaatttgatgcgaatgatgggagga
ggaatgaaaggtatgagataa

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