Flavobacterium sediminis: DI487_04990
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Entry
DI487_04990 CDS
T06625
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
fse
Flavobacterium sediminis
Brite
KEGG Orthology (KO) [BR:
fse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fse03032
]
DI487_04990
03036 Chromosome and associated proteins [BR:
fse03036
]
DI487_04990
03400 DNA repair and recombination proteins [BR:
fse03400
]
DI487_04990
DNA replication proteins [BR:
fse03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DI487_04990
Chromosome and associated proteins [BR:
fse03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DI487_04990
DNA repair and recombination proteins [BR:
fse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DI487_04990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
PqqD
Motif
Other DBs
NCBI-ProteinID:
AWM13281
UniProt:
A0A2U8QT57
LinkDB
All DBs
Position
1053874..1054167
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AA seq
97 aa
AA seq
DB search
MTKADIVAKISEKLGLEKADVQATVESFMEEVKNSLETGDNVYLRGFGSFIIKTRAEKTG
RNISKNTTIKIPAHNIPAFKPAKVFVEGVKTKTEVTV
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagcagatatcgtagcgaaaatttctgaaaaactaggtcttgaaaaagcagat
gttcaagcaacagttgaatctttcatggaagaagtgaaaaattcattagaaacaggagac
aatgtttacttaagaggtttcggaagcttcatcatcaaaacaagagctgaaaaaacagga
agaaacatctctaaaaacactacaattaaaattcctgcacacaacatccctgcatttaaa
cccgctaaagtttttgttgaaggagtaaaaacaaagactgaagtaaccgtataa
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