Flavobacterium sediminis: DI487_05005
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Entry
DI487_05005 CDS
T06625
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
fse
Flavobacterium sediminis
Pathway
fse00550
Peptidoglycan biosynthesis
fse01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DI487_05005 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
fse01003
]
DI487_05005 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fse01011
]
DI487_05005 (pbpC)
Enzymes [BR:
fse01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
DI487_05005 (pbpC)
Glycosyltransferases [BR:
fse01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
DI487_05005 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
fse01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
DI487_05005 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
Motif
Other DBs
NCBI-ProteinID:
AWM13284
UniProt:
A0A2U8QTW6
LinkDB
All DBs
Position
complement(1056035..1058401)
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AA seq
788 aa
AA seq
DB search
MQNKIFAYFKRHKIKTTIGIILVVVYYFSLPRTLFKDSYATVIESSNGQFLGAKIANDGQ
WRFPESDSVPYKFRQCIVAFEDQYFYKHIGFNPVAMLHAFQQNRAAGKVVRGGSTLTQQV
IRLYRKNAERSYLEKLFEVILATRLELRHSKDKILNLYASHAPFGGNVVGLEMASWRYFG
LQPHQLSWAEAATLAVLPNAPRLIYPGKNQELLLQKRDRLLHKLWQEKIIDKETYDLALL
EPLPQKPYAIPKIAPHLTEKINQEKRGQKITTTIDYNLQERVNEIVAQYYNVYKQNKVFN
MAVVVVDVKTRKVLSYVGNSPTDKEHQKDVDVIQAPRSTGSILKPFLYAAMLDEGELLSH
TLVPDIPTQISGYSPQNYNYTYDGAVPASRALARSLNIPAVLMLKEYSVNRFYEKLQKLK
QHHINRPPSHYGLSLILGGAETSLWDLCGAYAYMASTLNHFTQTQDLYRSNEMTALQYIG
NKPIDFGKEKREKNSYGAGAIWQTFNAMKEVNRPEGDEAWRFYDSSLEIAWKTGTSFGGR
DAWAVGVNPDYVVGVWVGNATGEGRPLLTGVESAAPVLFDVFRTLPRGEWFNQPYNDMEK
VMVCKQSGYLAQENCPTIEQWIPRTSKKTEVCPYHKMIHLDKSLKYTVNSNCEKVENIVS
KSWFILPPVMEWYYKSKHVDYIPVPPLRDDCKDANAKPRMAFIYPSEFTKIILTKDFNGI
EQPVILKVAHSNPDVELFWYIDDQFLGTTRTFHEKPLIASNGLHWVTVVDENGNEIKQRI
VIERSSGK
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataagatttttgcgtatttcaaacgtcataaaattaaaactaccatagggatt
attcttgtggtagtttattatttttcgttgccccgaaccttgtttaaggattcgtatgca
acagttattgaaagtagtaacggacagtttttgggagccaaaattgcaaatgacgggcaa
tggcgttttccggaaagcgacagtgtgccttataaattccggcagtgtattgttgcattt
gaggatcaatatttttacaagcacatcgggttcaatccggtagccatgctacatgctttc
caacagaatagagctgccggaaaagtagttcggggcggaagtactttaacgcaacaagtt
attcgtctatatagaaaaaatgcggaaagaagttatcttgaaaaactttttgaagtcatt
ttggccactcgtttggagttgcgacattctaaagataaaatcctgaatttatatgcttcg
catgcgcctttcggagggaatgttgtaggtttggaaatggcttcctggcggtatttcggt
ttgcaaccgcatcaattgtcctgggcggaagccgcaactttggccgttttacctaatgcg
ccaaggttgatctatcccggtaaaaatcaggaactgttattgcaaaaacgagatcgcttg
ttgcataagctttggcaagaaaaaattatcgataaagagacgtatgacttggccttgttg
gaaccgcttcctcaaaagccttatgccatacctaaaatagctccgcatttgacggaaaag
atcaatcaggaaaaacgagggcaaaaaataaccacaactattgattataacctacaggag
cgagttaatgaaattgttgcacagtattataatgtgtataagcaaaataaggtttttaat
atggcagttgtagtagttgatgtcaaaacccgaaaagtgctttcgtatgtggggaattcg
ccaacagataaagaacaccaaaaagatgtcgatgtaattcaggcacccagaagtaccggt
agtattttgaagccttttttgtatgcagcgatgttagacgaaggagagttgctgtcacat
acattggttcctgatataccgacgcagatcagcggctattcgccacagaattataattat
acttatgacggagctgttccggcaagcagagctctggcacgttctttaaacattccggca
gtacttatgttaaaagaatattcagtgaatcgtttttatgaaaagctgcaaaaactaaaa
caacatcatattaacagacccccttctcattatgggctatcattgatattaggaggtgca
gaaaccagtttatgggatttgtgtggagcgtatgcgtatatggcttcaaccctgaatcat
tttacacaaacgcaggatttgtacagaagtaatgaaatgaccgcgcttcaatatatcggg
aataaaccaattgatttcggaaaagaaaaaagggaaaagaatagctacggagcaggagct
atttggcaaacttttaatgctatgaaagaggtaaatagaccggaaggagatgaagcatgg
cgtttttatgattcttctttggaaattgcctggaaaaccggaaccagttttggcggtagg
gatgcgtgggctgtaggagtaaatccggattatgttgttggtgtttgggtaggtaatgcc
acaggagaaggtcggccgttattaacaggtgtggaaagtgctgctccggttttgtttgat
gttttcaggacgttaccgagaggggaatggtttaatcagccatacaatgatatggagaaa
gtaatggtttgtaagcaatccggctatttggcacaggaaaactgtccgaccatagagcaa
tggatccctagaacttctaaaaaaacggaggtatgcccgtatcataagatgattcattta
gataagagtttgaagtatacggtaaatagcaattgtgaaaaggtagagaatatagtttct
aaatcgtggtttattttacctccggttatggagtggtattataaaagcaaacatgtagat
tatattccggtgccaccgttgcgcgacgattgtaaggatgctaatgcaaaaccgagaatg
gcatttatttatccgagtgaattcactaaaattattttgacaaaagattttaacggaatc
gaacaacccgtgattttaaaagtggcacattccaatccggatgtggagcttttctggtat
attgacgatcagtttttagggacaaccagaacctttcatgagaaacctttaatagcttca
aacggattgcattgggtcactgttgtagatgaaaatggcaatgaaattaaacagcgaata
gtgattgaaaggagtagtggaaaataa
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