Flavobacterium sediminis: DI487_05085
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Entry
DI487_05085 CDS
T06625
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
fse
Flavobacterium sediminis
Brite
KEGG Orthology (KO) [BR:
fse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fse03009
]
DI487_05085
Enzymes [BR:
fse01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DI487_05085
Ribosome biogenesis [BR:
fse03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DI487_05085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AWM13297
UniProt:
A0A2U8QSZ8
LinkDB
All DBs
Position
complement(1080919..1081791)
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AA seq
290 aa
AA seq
DB search
MSRHQGNDRKNPGSGRQGGFRKERSSRGNDKFASGQPKFFKQEAKPKSKPVAANPDEIRL
NRYIANSGMCSRREADIYIQSGNVKVNGEVVTEMGYKVKPGDTVQFDGATITPEKKEYVL
LNKPKNFSTSHDEEKNAPSVLDLVRNASRAKLQPVGRMDKTTTGLLLFTNDTDLIKKFTS
PNQRSTKLYQVSLDRNLKFEDLEKIQGGITIDGHKVFVEEITYIDNEPKSEIGVKMKTAN
IKIVRKIFEQLKYNVIKLDRVMFAGLTKKNLPRGNWRFLTDQEIINLKNS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtcatcaagggaatgatagaaagaatcctggttcaggaagacaaggagggttt
agaaaggaacgaagttcgagagggaatgacaaatttgcaagtggtcagcctaagttcttt
aaacaggaggctaagccaaaatcaaaaccagtagccgctaatccggatgaaatccgtttg
aatcgctacatagcgaattccggtatgtgtagccgaagagaagcagatatttatattcaa
agcggaaacgtaaaagttaacggagaggttgtaactgaaatgggctataaagttaagccg
ggcgatactgttcagtttgacggtgccacaattaccccggaaaagaaagaatatgtacta
ttaaacaagccgaagaatttctccacatcgcacgatgaagagaagaatgcacccagtgtt
ttggatttagtacgaaatgcaagtagagctaaactgcaaccggtaggtagaatggataaa
accacaacagggttgttgttgtttacaaatgatactgacctgattaaaaagtttacaagt
cctaatcagcgttctactaagttgtatcaggtaagtttagacagaaatctgaaatttgaa
gatttagaaaagatacaaggaggaataaccattgacgggcacaaagtttttgtagaagag
atcacatatattgacaatgagcctaaaagcgagatcggtgtgaaaatgaaaaccgctaat
atcaagattgttcgtaagatctttgaacaattaaaatataatgtgatcaaattagatcgg
gtaatgtttgccgggttaactaaaaagaatttaccccgtggaaactggagatttttaacc
gatcaggagatcattaatctaaaaaatagctaa
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