Flavobacterium sediminis: DI487_06360
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Entry
DI487_06360 CDS
T06625
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
fse
Flavobacterium sediminis
Pathway
fse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DI487_06360 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fse03400
]
DI487_06360 (recO)
DNA repair and recombination proteins [BR:
fse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DI487_06360 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DI487_06360 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AWM13518
UniProt:
A0A2U8QTP8
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All DBs
Position
complement(1383531..1384241)
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AA seq
236 aa
AA seq
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MLVKTKAIVISSLKYQEKSLIVKCLTVSDGLKSYFIANAFTGKKNQQKSSFFQPLTILGI
EAYHKNKGTLERFKEIQIETPYQTIHQDIYKTTITLFLSDMLHHALKEDGKNETLFTFLE
TALTWLDSHDEVSNFHLITLLQLTRYLGFYPQSDVDLPFFEMTEGIFVPFQSLTCLSEEE
TKLFKTLLQLRFSDDQKVFSGSQRQKLLKMIVDYYSFNIEGFRKPKSLEVLKEVFG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcaaaacgaaagcaatagttatctcatccctaaagtatcaggaaaaaagctta
attgtaaaatgtctgacggtttccgatggcttgaaatcgtatttcatagccaacgctttc
accggaaaaaaaaatcagcaaaaaagctcatttttccagcctttgactatcttaggaata
gaagcctatcataaaaacaaaggaacactggagcgatttaaagaaattcagatagaaaca
ccgtaccaaacgatccatcaggatatttataaaacgaccatcacactttttctttcagac
atgctgcaccatgcgctgaaagaagacggaaaaaatgaaaccttatttacgtttttagaa
acagccttaacatggcttgattcgcatgatgaagtctctaatttccatttgatcaccttg
ctgcaattaacgcgctatttaggattttatccgcaatcagacgttgatttaccttttttc
gaaatgacagaaggcatttttgtgcctttccagtcccttacctgcttgtcagaagaagaa
accaaactctttaaaacactgcttcagctgagattttcagacgatcaaaaagtattttca
ggaagtcaaagacaaaagttacttaaaatgatcgtagactattacagttttaatatcgaa
ggcttccggaaacccaaatctttagaagttctaaaagaagttttcggataa
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