Flavobacterium sediminis: DI487_08080
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Entry
DI487_08080 CDS
T06625
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fse
Flavobacterium sediminis
Brite
KEGG Orthology (KO) [BR:
fse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fse03016
]
DI487_08080 (truB)
Enzymes [BR:
fse01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DI487_08080 (truB)
Transfer RNA biogenesis [BR:
fse03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DI487_08080 (truB)
Prokaryotic type
DI487_08080 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AWM13825
UniProt:
A0A2U8QVK6
LinkDB
All DBs
Position
complement(1745596..1746294)
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AA seq
232 aa
AA seq
DB search
MQAEDFTEGKVLLIDKPLTWSSFQAVNKLKYVLKRKFNLSKRFKIGHAGTLDPLATGLLI
ICTGKFTKKINEIQAQEKEYTGTILLGATTPSYDLETEVDQTFPTEHITEVLLQETLPQF
TGEILQKPPVFSAIKKDGKRLYEHARAGEEVEIEARKTTIYEFELTRIALPEVDFRVKCS
KGTYIRSLAHDFGKALLSGGHLTALRRTKIGTYDVADAISPNEFEEKINHED
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcagaggactttacggaaggaaaagtacttttgatcgacaaaccgcttacctgg
agctcgttccaggcagtgaataaactgaaatacgttttaaaacgaaagttcaatttgtcc
aaacgttttaaaataggacatgccggaactttagatcccctagcgaccggattgcttatt
atctgcaccggaaagtttaccaaaaagatcaacgagatacaggctcaggagaaggaatat
accggaacgatccttttgggagccacaacgccttcttacgacttagagaccgaagtagat
caaacctttcctacagaacatattactgaggtattgcttcaggaaactttaccgcaattc
accggagagatactgcaaaaaccacctgttttttcggctattaaaaaagacggaaagcgt
ttgtatgaacacgctcgtgccggtgaagaagtggaaattgaagcccgaaaaactacgatt
tacgaatttgaattgactcgcattgccttaccggaagttgatttcagagtaaaatgcagc
aaaggaacctatattcgttcactggctcacgatttcggaaaagccttgctttccggaggg
catttgacagcacttcgacgaactaaaatcggcacttatgatgttgctgatgcaatcagt
ccgaatgaatttgaagaaaagatcaaccatgaagactaa
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