Flavobacterium sediminis: DI487_09470
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Entry
DI487_09470 CDS
T06625
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
fse
Flavobacterium sediminis
Brite
KEGG Orthology (KO) [BR:
fse00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fse01002
]
DI487_09470
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fse01011
]
DI487_09470
Peptidases and inhibitors [BR:
fse01002
]
Cysteine peptidases
Family C82
DI487_09470
Peptidoglycan biosynthesis and degradation proteins [BR:
fse01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
DI487_09470
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Nas2_N
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AWM14062
UniProt:
A0A2U8QV23
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All DBs
Position
complement(2043923..2045515)
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AA seq
530 aa
AA seq
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MPLKNYFLYVSVFIVLSCNKNNTLATSEDDALLKDQETEEIARPIPETLLEHKSDSIRLY
YHLFRNKEIWYNSINRKALLSEIENCGKDGLFSKDYEFAKLSELEKKHSELNDDESIAYD
FLLTEMFEKLAHHLHGGKLNPKKIYDDWDLNPKKIALSKRLEKAIMEKQVSQLFDSLKPQ
HYVYSTIKKSLVLLNAFPDTDFKKIQLAKKIELNDTIDVMINIKKRLAYWNDYKPKDSII
TAVYDSITYLAVKKFQNRHGLIPDGVIGNGTIKALNYSKSERREQIFANLERWKWFPDDF
GSDYLIANLPEYKIYYIVNKDTISVHNIVVGKPSRKTPVLTSKLSNFVFNPTWTVPPTII
KEDLTPSASKNREYFERNRITIFNKSGEVIAPSDWNPEKAKTFRYVQTSGYNNSLGLVKF
NFPNRHLVYLHDTNHRDYFSRETRALSSGCVRIEKPLDLAEMILKKEDAKKWNRTEIDSI
LSKKNSRIVNLNSTVNVFFLYWTNWSKSNQLYFCNDMYGYDKKLFELLRN
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgccgctaaaaaattactttttatacgtttctgtatttatagtcctgagttgtaacaag
aataacactttagcaacttcagaagatgatgctttactgaaagatcaagaaacggaagag
attgcaagaccgattcctgaaacacttttagaacacaaaagtgactctattcgattgtat
tatcatttattccgaaacaaagagatctggtataacagcattaacagaaaagcattgctg
tccgaaattgagaattgtggcaaggatggtttgttttctaaagattatgaattcgcaaaa
ctttctgaattagaaaaaaaacattctgaactgaatgatgacgagagtatcgcatacgat
tttctactcacagaaatgtttgaaaaattagcgcatcatttacatggcggtaaattaaat
ccgaaaaaaatatatgatgactgggatctgaacccgaaaaaaattgcattatctaaaaga
ttagagaaagctattatggaaaaacaagtctctcaacttttcgattctctgaaaccgcaa
cattacgtttacagtactattaaaaaaagcttagtccttttaaatgcttttcctgacact
gactttaaaaagattcaattggctaaaaaaattgaattaaacgatactattgacgttatg
atcaacatcaaaaaaagattggcgtattggaatgactacaaacccaaagacagcatcatc
actgcggtctatgattcaattacttatttagccgtaaaaaaatttcaaaaccgtcacgga
ctaattccagacggagtaataggcaacggcactattaaggctcttaactattctaaaagc
gaacgaagagaacagatttttgctaatttagaacgctggaaatggtttcctgatgatttt
ggcagtgattatctaatcgctaatttaccggaatataagatctactatatcgtaaacaaa
gatacaatctcagtacacaatattgtagtcggaaaaccatcacgtaaaactccggtctta
acctctaaactttcaaactttgtatttaaccctacttggacggttcctccgactattata
aaagaagatctgacgccttcagcctcaaaaaatagagaatattttgaacgaaacaggatt
actatctttaataaaagcggagaagttatagcgccttctgactggaatcctgaaaaagcc
aaaacctttagatatgtacaaacatccggttacaacaattctttaggattagtgaaattt
aatttccccaaccgccatctggtatatctacatgataccaatcacagggattatttctca
agagagaccagggccttgagttcggggtgtgtacgaattgaaaaacctttggatcttgct
gaaatgattttaaagaaagaagatgctaagaaatggaacaggactgagatcgactctatt
ttaagcaaaaaaaacagtagaattgtcaacttaaattctactgttaatgtgtttttcctg
tactggacaaattggtcaaaaagcaatcaactttatttctgtaatgatatgtacggttac
gacaaaaaattatttgaactattacgaaactaa
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