Flavobacterium sediminis: DI487_09760
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Entry
DI487_09760 CDS
T06625
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
fse
Flavobacterium sediminis
Pathway
fse02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fse00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DI487_09760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fse03021
]
DI487_09760
Transcription machinery [BR:
fse03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DI487_09760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
PgaD
DUF6285
Motif
Other DBs
NCBI-ProteinID:
AWM14109
UniProt:
A0A2U8QVL3
LinkDB
All DBs
Position
complement(2099893..2100756)
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AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQRIKAGDQRALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKMYALLEQSSERAPSAEEIAKELDMTVNDVKESMKNSGRHL
SMDAPLVEGEDSNLYDVLRSGESPNPDRELIHESLQTEIERALETLTPREADVVRLYFGL
GDQHPMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacagctcaaaattacgaagcaggttacaaaccgtgagactgcttctttagacaaa
taccttcaagagattggtaaagttgatcttattactgctgatgaagaggtagaattagca
caaagaatcaaagccggtgaccaaagagcattggaaaaattgactaaagctaatttacgt
ttcgtggtatcggttgcaaaacaatatcaaaatcaaggacttacactacccgatttaatt
aatgaaggtaacttaggcttgattaaagcagcacaacgttttgatgaaacccgtggtttt
aaattcatttcctatgctgtttggtggattcgtcaatctatcttacaagctttggcagaa
caatcacgtattgtacgtttgccactgaataaaatcggttccatcaacaagatcaacaaa
atgtatgctttattggagcaatccagtgagcgtgccccatctgctgaagagattgcaaaa
gagttggacatgacagtaaatgacgttaaagagtctatgaaaaattcaggacgtcactta
tccatggatgccccgcttgtagaaggtgaagattcgaacttatacgatgtcttacgttcc
ggagaatctccgaaccctgacagagaattgatccacgaatctttgcagactgaaatcgaa
agagctttggaaacactgactccaagagaagctgatgtggttcgcttatacttcggttta
ggagatcaacatccgatgactttggaagagatcggtgaaacttttgatttaactcgtgag
cgtgttcgccagatcaaagaaaaagcgatcagacgattaaaacacacttcaagaagtaaa
attttgaaaacatatttaggctaa
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