Flavobacterium sediminis: DI487_12070
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Entry
DI487_12070 CDS
T06625
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fse
Flavobacterium sediminis
Pathway
fse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DI487_12070 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fse03400
]
DI487_12070 (priA)
Enzymes [BR:
fse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DI487_12070 (priA)
DNA repair and recombination proteins [BR:
fse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DI487_12070 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_CRR
PriA_C
DnaB_C
Nrap_D6
Penicillinase_R
nSTAND3
AAA_19
AAA_22
zinc-ribbons_6
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-ProteinID:
AWM14520
UniProt:
A0A2U8QWD7
LinkDB
All DBs
Position
2606112..2608565
Genome browser
AA seq
817 aa
AA seq
DB search
MLYFIEVVLPLAVAKTFTYQVSEAEFDFVQIGMRVAVPFGKTKIYTALIVGKHNTPPQLY
QPKEIHQILDEKPIVNELQIQHWNWVADYYMCTIGDVFKAAVPSGFILESETQLLPKEVE
NLPDHQLKDDEYLILEALRHQSSITLQEVVKILGKKTVIPTINSLLSKGAIALHEEMTEQ
YKPKLVRYIKLHVIYHQQEHLVELLEILSRAPKQRELVLHYFQLHVRERKPIAVKELIES
SGASIAVIKALIDKDVFEEYYIHEDRVQFEKKEDASFELSLAQAAAFSAIEKGFQQQNVM
LLHGVTASGKTEIYIKLIEQFLKEEQQQVLFLLPEIALTAQLVQRLTAYFGNQIAVFHSK
YSNNERIEVWNNLLQNSENARVVIGVRSALFLPFSDLGLIVVDEEHEQTFKQKDPAPRYH
ARDAAVVLAKLHNAKVLLGSATPSLESYYNVKTGKYGLVELKERYGNVVLPEIQLIDLKD
KYFRKRMTGHFSDVLLENIKETVHNGEQVILFQNRRGFSPYVECLTCGHVPHCPNCDVSL
TYYKYKNQLKCHYCGYNIANPTHCHSCNSLDLNAKGFGTEQIEQELVRLFPDKKIGRMDQ
DTTRGKFGFEKIIDSFKNREFDILVGTQMLAKGLDFDNVTLVGILNADNLLNQPDFRAYE
RAFQLLTQVSGRAGRKEKKGKVLIQTYNPYHNTIQQVVNNDYAAMFQEQLYERKNFKYPP
FYRIIRLTLKHKDYDKLKEGSLWMYNVLKQHLNIPVLGPEEPMVSKIRNEYLRTILVKIP
AENHLGKTKKTIQKILNSFEAVSHYRSIKVSANVDYY
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgttgtattttatagaagtagttttgccattggcggttgccaaaacttttacataccag
gtttccgaagcagagtttgacttcgtacaaattggtatgcgggttgctgtcccctttggt
aaaaccaaaatttatacagctttgatcgtcggaaaacacaatacaccaccgcaattatat
caacccaaagaaattcatcagatattagatgagaaacctattgtaaatgaattacaaatt
caacattggaattgggttgcggattattacatgtgtactataggagatgtgtttaaagcg
gcggtgccgtccggatttattctggaaagtgaaacacaactactgcctaaagaagtagaa
aaccttccggatcatcaattaaaggatgatgagtatcttattctggaagcgttacgacat
cagtcatctataacgttacaggaagttgttaagatcttagggaaaaaaacagtaataccg
acaattaactcgttattgtcaaaaggggcaattgcgctacatgaagaaatgacagagcaa
tacaagcctaaattggttcgctatattaagcttcacgttatttaccatcaacaagagcac
ttggtggaattgctggaaatactgtcaagagcgcctaagcaacgagagttggttctgcat
tattttcaattgcatgtaagagagcgaaaacctattgctgttaaagaattaatagagagt
tcaggagctagtatagcagtgataaaagccttaattgataaagatgtatttgaagaatat
tatattcatgaagatcgagtacaatttgagaaaaaagaagatgcttcttttgaattgagt
ttggcacaggctgccgctttttcagccattgaaaaaggatttcagcaacagaatgtaatg
ctattgcatggcgttacagcatccggtaaaacggagatttacatcaagcttatagagcag
ttcttaaaagaggaacagcagcaagtgttgtttctgttgccggaaattgctttgacagct
caattggtacaacggctgacggcttatttcggaaatcagattgctgtttttcattcaaaa
tactctaacaatgaaaggatagaggtctggaataatttattacagaattctgaaaatgca
cgggttgtaataggggtccgaagtgctttatttttgcctttttctgatctggggttaatc
gtggtagatgaagaacacgagcaaacatttaagcaaaaagatccggcaccgcgttatcat
gccagagatgctgctgtcgttctagctaaattgcacaatgcaaaagtcttattgggaagt
gctacaccaagcctagaatcgtattacaatgtgaaaacagggaaatacggtttagtggag
ttgaaagaacgttacggaaatgttgtgctgcctgaaattcagctaatcgatctgaaagat
aaatatttcagaaagcgaatgacagggcatttttcggatgttttactggaaaatataaaa
gagacggttcataacggagagcaagtgatcttgtttcaaaacagacgaggcttttctcct
tatgtagaatgtttaacctgcggacatgttccgcattgcccgaattgcgatgtcagttta
acgtactataagtataaaaaccagcttaaatgtcattattgcgggtataatatcgctaat
ccgacccattgtcatagttgtaattctttagatttgaatgcaaaaggcttcggaacggag
caaatagaacaagaattggtacgactatttccggataaaaaaataggacgaatggaccaa
gatacaaccagaggaaagtttggttttgaaaaaataatcgattcattcaagaacagagaa
tttgatattttggtgggaacccaaatgttagccaaaggtctggattttgataatgtaact
ttggtcggtatactgaatgcggataacttactgaatcagcccgattttagagcttatgaa
agagcttttcagctattgacacaagtatcgggcagggcagggcgaaaagagaaaaaaggg
aaagtactgatccagacctataatccgtatcacaatacaatacagcaagtggttaataat
gattatgcagcaatgtttcaggaacaactatacgaacgaaagaattttaaatatcctcct
ttttatcgcatcatccgattaaccttgaaacacaaggattatgataaattgaaagaaggt
tcgctttggatgtataatgtgttgaaacaacatttgaatattcctgttttaggaccggag
gaaccaatggtgagtaagattcgaaacgaatacctgagaactattttggttaaaattccg
gctgagaaccacttgggaaaaacaaaaaaaactatccaaaagattttgaatagttttgaa
gcggtttcacattaccgaagtataaaagtttcggctaatgtagattattactaa
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